Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 AC020915.5-201ENST00000596836 964 ntBASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 AC093765.1-201ENST00000603758 881 ntBASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 AL133338.2-201ENST00000604292 736 ntBASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 ZNF137P-201ENST00000456718 1920 ntBASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 AL031119.1-201ENST00000404707 1879 ntBASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 ZFRP1-201ENST00000457579 2970 ntBASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.79□□□□□ -1.64
RFWD3Q6PCD5 AC108467.2-201ENST00000617640 1597 ntBASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 AC021146.4-201ENST00000309229 279 ntBASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 RNU1-32P-201ENST00000363937 159 ntBASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 SNORA71.2-201ENST00000364941 134 ntBASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 RPS3AP23-201ENST00000401762 784 ntBASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 RN7SKP247-201ENST00000411094 308 ntBASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 FAM204CP-201ENST00000424489 642 ntBASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 AC106901.1-201ENST00000425086 698 ntBASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 DNAJC19P7-201ENST00000428811 344 ntBASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 RPL23AP1-201ENST00000428990 471 ntBASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 AC068287.1-201ENST00000430283 295 ntBASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 ARL4AP3-201ENST00000441452 574 ntBASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 AC009220.1-201ENST00000451614 275 ntBASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 snoU13.1-201ENST00000459157 104 ntBASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFWD3Q6PCD5 AC000123.3-201ENST00000624029 4975 ntBASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 OR14L1P-202ENST00000641545 3009 ntBASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 AC010132.2-201ENST00000295493 1043 ntBASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 RNU1-20P-201ENST00000363314 162 ntBASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 MIR659-201ENST00000384963 97 ntBASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 SNORA68.2-201ENST00000391263 128 ntBASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 AL080315.1-201ENST00000406055 466 ntBASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 AC016397.1-201ENST00000412463 242 ntBASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 RN7SKP34-201ENST00000516142 244 ntBASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 MTND2P7-201ENST00000521337 640 ntBASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 RPL21P7-201ENST00000557463 483 ntBASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 AC233280.2-201ENST00000603917 1070 ntBASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 AC067838.1-201ENST00000606064 577 ntBASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 AL159169.2-201ENST00000610061 1269 ntBASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 AC239803.2-201ENST00000610161 430 ntBASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 AL158062.1-201ENST00000619632 745 ntBASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 AC140113.4-201ENST00000622087 222 ntBASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 AC104820.1-201ENST00000624183 307 ntBASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 AL049536.1-201ENST00000625043 744 ntBASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms