Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 AC009643.2-201ENST00000603543 1448 ntBASIC4.29□□□□□ -1.72
RIF1Q5UIP0 AC092681.1-201ENST00000297369 291 ntBASIC4.29□□□□□ -1.72
RIF1Q5UIP0 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 AL390879.2-203ENST00000426943 1121 ntBASIC4.29□□□□□ -1.72
RIF1Q5UIP0 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 MTND6P5-201ENST00000448266 512 ntBASIC4.29□□□□□ -1.72
RIF1Q5UIP0 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
RIF1Q5UIP0 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RIF1Q5UIP0 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.28□□□□□ -1.72
RIF1Q5UIP0 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.28□□□□□ -1.72
RIF1Q5UIP0 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RIF1Q5UIP0 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
RIF1Q5UIP0 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RIF1Q5UIP0 U8.11-201ENST00000384699 133 ntBASIC4.28□□□□□ -1.72
RIF1Q5UIP0 U8.12-201ENST00000384701 133 ntBASIC4.28□□□□□ -1.72
RIF1Q5UIP0 AP000357.1-201ENST00000409926 1165 ntBASIC4.28□□□□□ -1.72
RIF1Q5UIP0 AC114495.1-201ENST00000441274 436 ntBASIC4.28□□□□□ -1.72
RIF1Q5UIP0 U8.18-201ENST00000459285 133 ntBASIC4.28□□□□□ -1.72
RIF1Q5UIP0 MTND6P6-201ENST00000478031 263 ntBASIC4.28□□□□□ -1.72
RIF1Q5UIP0 GAPDHP36-201ENST00000480688 918 ntBASIC4.28□□□□□ -1.72
RIF1Q5UIP0 AL358832.1-201ENST00000497800 389 ntBASIC4.28□□□□□ -1.72
RIF1Q5UIP0 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.28□□□□□ -1.72
RIF1Q5UIP0 AP001804.1-201ENST00000526868 919 ntBASIC4.28□□□□□ -1.72
RIF1Q5UIP0 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.28□□□□□ -1.72
RIF1Q5UIP0 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.28□□□□□ -1.72
RIF1Q5UIP0 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC4.28□□□□□ -1.72
RIF1Q5UIP0 AL031119.1-201ENST00000404707 1879 ntBASIC4.28□□□□□ -1.72
RIF1Q5UIP0 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RIF1Q5UIP0 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.28□□□□□ -1.72
RIF1Q5UIP0 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RIF1Q5UIP0 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
RIF1Q5UIP0 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RIF1Q5UIP0 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RIF1Q5UIP0 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC4.28□□□□□ -1.72
RIF1Q5UIP0 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RIF1Q5UIP0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.28□□□□□ -1.72
RIF1Q5UIP0 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.28□□□□□ -1.72
RIF1Q5UIP0 RPS20P21-201ENST00000466859 343 ntBASIC4.28□□□□□ -1.72
RIF1Q5UIP0 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.28□□□□□ -1.72
RIF1Q5UIP0 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.28□□□□□ -1.72
RIF1Q5UIP0 RNA5SP73-201ENST00000516744 108 ntBASIC4.28□□□□□ -1.72
RIF1Q5UIP0 AL031985.2-201ENST00000600955 480 ntBASIC4.28□□□□□ -1.72
RIF1Q5UIP0 AL450472.3-201ENST00000615578 367 ntBASIC4.28□□□□□ -1.72
RIF1Q5UIP0 AC006453.5-201ENST00000636451 619 ntBASIC4.28□□□□□ -1.72
RIF1Q5UIP0 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RIF1Q5UIP0 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RIF1Q5UIP0 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
RIF1Q5UIP0 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 AC073342.2-201ENST00000595842 1800 ntBASIC4.27□□□□□ -1.73
RIF1Q5UIP0 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 AC006206.1-201ENST00000544842 3387 ntBASIC4.27□□□□□ -1.73
RIF1Q5UIP0 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 MIR331-201ENST00000362302 94 ntBASIC4.27□□□□□ -1.73
RIF1Q5UIP0 RNU6-213P-201ENST00000384051 104 ntBASIC4.27□□□□□ -1.73
RIF1Q5UIP0 SNORA48.2-201ENST00000390926 124 ntBASIC4.27□□□□□ -1.73
RIF1Q5UIP0 VN1R51P-201ENST00000411675 945 ntBASIC4.27□□□□□ -1.73
RIF1Q5UIP0 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 AC090142.1-201ENST00000465776 462 ntBASIC4.27□□□□□ -1.73
RIF1Q5UIP0 AC069304.1-201ENST00000491593 704 ntBASIC4.27□□□□□ -1.73
RIF1Q5UIP0 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 AL591135.1-201ENST00000401578 5914 ntBASIC4.27□□□□□ -1.73
RIF1Q5UIP0 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 AC011447.7-201ENST00000624228 1590 ntBASIC4.27□□□□□ -1.73
RIF1Q5UIP0 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 OR4K6P-201ENST00000416478 897 ntBASIC4.27□□□□□ -1.73
RIF1Q5UIP0 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.27□□□□□ -1.73
RIF1Q5UIP0 ACTR3P3-201ENST00000480448 893 ntBASIC4.27□□□□□ -1.73
RIF1Q5UIP0 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms