Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
RFX7Q2KHR2 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RFX7Q2KHR2 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
RFX7Q2KHR2 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RFX7Q2KHR2 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.36□□□□□ -1.55
RFX7Q2KHR2 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.36□□□□□ -1.55
RFX7Q2KHR2 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.36□□□□□ -1.55
RFX7Q2KHR2 ARAFP1-201ENST00000422172 605 ntBASIC5.36□□□□□ -1.55
RFX7Q2KHR2 RPS12P10-201ENST00000427031 377 ntBASIC5.36□□□□□ -1.55
RFX7Q2KHR2 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.36□□□□□ -1.55
RFX7Q2KHR2 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RFX7Q2KHR2 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RFX7Q2KHR2 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.36□□□□□ -1.55
RFX7Q2KHR2 RNA5SP497-201ENST00000516081 97 ntBASIC5.36□□□□□ -1.55
RFX7Q2KHR2 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.36□□□□□ -1.55
RFX7Q2KHR2 MRPL49P2-201ENST00000521066 465 ntBASIC5.36□□□□□ -1.55
RFX7Q2KHR2 CYCSP29-201ENST00000533731 318 ntBASIC5.36□□□□□ -1.55
RFX7Q2KHR2 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RFX7Q2KHR2 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.36□□□□□ -1.55
RFX7Q2KHR2 AC005034.4-201ENST00000603612 899 ntBASIC5.36□□□□□ -1.55
RFX7Q2KHR2 AL109618.2-201ENST00000605527 211 ntBASIC5.36□□□□□ -1.55
RFX7Q2KHR2 AC073869.7-201ENST00000640874 297 ntBASIC5.36□□□□□ -1.55
RFX7Q2KHR2 LINC01808-202ENST00000641680 1116 ntBASIC5.36□□□□□ -1.55
RFX7Q2KHR2 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.36□□□□□ -1.55
RFX7Q2KHR2 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
RFX7Q2KHR2 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
RFX7Q2KHR2 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.35□□□□□ -1.55
RFX7Q2KHR2 MAPK10-320ENST00000641462 6696 ntBASIC5.35□□□□□ -1.55
RFX7Q2KHR2 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RFX7Q2KHR2 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.35□□□□□ -1.55
RFX7Q2KHR2 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.35□□□□□ -1.55
RFX7Q2KHR2 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.35□□□□□ -1.55
RFX7Q2KHR2 RPS27AP15-201ENST00000447672 466 ntBASIC5.35□□□□□ -1.55
RFX7Q2KHR2 RPL7P19-201ENST00000469948 618 ntBASIC5.35□□□□□ -1.55
RFX7Q2KHR2 RN7SL691P-201ENST00000494487 301 ntBASIC5.35□□□□□ -1.55
RFX7Q2KHR2 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RFX7Q2KHR2 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.35□□□□□ -1.55
RFX7Q2KHR2 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.35□□□□□ -1.55
RFX7Q2KHR2 AC124068.1-201ENST00000563131 678 ntBASIC5.35□□□□□ -1.55
RFX7Q2KHR2 Z98200.1-201ENST00000607298 470 ntBASIC5.35□□□□□ -1.55
RFX7Q2KHR2 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.35□□□□□ -1.55
RFX7Q2KHR2 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.35□□□□□ -1.55
RFX7Q2KHR2 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.35□□□□□ -1.55
RFX7Q2KHR2 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.35□□□□□ -1.55
RFX7Q2KHR2 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFX7Q2KHR2 PROS2P-201ENST00000474651 1951 ntBASIC5.35□□□□□ -1.55
RFX7Q2KHR2 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.35□□□□□ -1.55
RFX7Q2KHR2 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.35□□□□□ -1.55
RFX7Q2KHR2 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.34□□□□□ -1.55
RFX7Q2KHR2 MAPK10-303ENST00000641324 3959 ntBASIC5.34□□□□□ -1.55
RFX7Q2KHR2 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RFX7Q2KHR2 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.34□□□□□ -1.55
RFX7Q2KHR2 AC083843.2-201ENST00000568248 6253 ntBASIC5.34□□□□□ -1.55
RFX7Q2KHR2 RNA5SP366-201ENST00000365454 123 ntBASIC5.34□□□□□ -1.55
RFX7Q2KHR2 MIR3065-201ENST00000390137 79 ntBASIC5.34□□□□□ -1.55
RFX7Q2KHR2 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.34□□□□□ -1.55
RFX7Q2KHR2 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.34□□□□□ -1.55
RFX7Q2KHR2 NFYAP1-201ENST00000431953 972 ntBASIC5.34□□□□□ -1.55
RFX7Q2KHR2 RPEP2-201ENST00000432149 701 ntBASIC5.34□□□□□ -1.55
RFX7Q2KHR2 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.34□□□□□ -1.55
RFX7Q2KHR2 UBE2V1P3-201ENST00000439651 417 ntBASIC5.34□□□□□ -1.55
RFX7Q2KHR2 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.34□□□□□ -1.55
RFX7Q2KHR2 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.34□□□□□ -1.55
RFX7Q2KHR2 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
RFX7Q2KHR2 AC091167.1-201ENST00000492017 396 ntBASIC5.34□□□□□ -1.55
RFX7Q2KHR2 NPM1P6-201ENST00000521088 871 ntBASIC5.34□□□□□ -1.55
RFX7Q2KHR2 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.34□□□□□ -1.55
RFX7Q2KHR2 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.34□□□□□ -1.55
RFX7Q2KHR2 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.34□□□□□ -1.55
RFX7Q2KHR2 AC079587.1-201ENST00000603846 277 ntBASIC5.34□□□□□ -1.55
RFX7Q2KHR2 AC007546.1-201ENST00000619452 559 ntBASIC5.34□□□□□ -1.55
RFX7Q2KHR2 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.34□□□□□ -1.55
RFX7Q2KHR2 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RFX7Q2KHR2 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
RFX7Q2KHR2 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RFX7Q2KHR2 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.56
RFX7Q2KHR2 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.34□□□□□ -1.56
RFX7Q2KHR2 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RFX7Q2KHR2 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
RFX7Q2KHR2 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.34□□□□□ -1.56
RFX7Q2KHR2 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RFX7Q2KHR2 DDX18P4-201ENST00000511690 1966 ntBASIC5.33□□□□□ -1.56
RFX7Q2KHR2 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFX7Q2KHR2 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RFX7Q2KHR2 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RFX7Q2KHR2 AL672167.1-205ENST00000641112 3080 ntBASIC5.33□□□□□ -1.56
RFX7Q2KHR2 AL513548.1-201ENST00000562904 1724 ntBASIC5.33□□□□□ -1.56
RFX7Q2KHR2 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFX7Q2KHR2 RPL23AP26-201ENST00000412728 464 ntBASIC5.33□□□□□ -1.56
RFX7Q2KHR2 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RFX7Q2KHR2 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.33□□□□□ -1.56
RFX7Q2KHR2 AC005008.1-201ENST00000456151 612 ntBASIC5.33□□□□□ -1.56
RFX7Q2KHR2 SLC25A15P5-201ENST00000508033 253 ntBASIC5.33□□□□□ -1.56
RFX7Q2KHR2 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.33□□□□□ -1.56
RFX7Q2KHR2 AC106806.2-201ENST00000509365 500 ntBASIC5.33□□□□□ -1.56
RFX7Q2KHR2 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.33□□□□□ -1.56
RFX7Q2KHR2 AC100770.1-201ENST00000532310 322 ntBASIC5.33□□□□□ -1.56
RFX7Q2KHR2 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RFX7Q2KHR2 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RFX7Q2KHR2 AL160290.3-201ENST00000604869 165 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms