Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 CCT8P1-201ENST00000413611 1657 ntBASIC5.48□□□□□ -1.53
PDS5AQ29RF7 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 MFSD8-242ENST00000641690 4199 ntBASIC5.48□□□□□ -1.53
PDS5AQ29RF7 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 OR56B2P-201ENST00000317102 954 ntBASIC5.48□□□□□ -1.53
PDS5AQ29RF7 RPL32P3-201ENST00000359025 275 ntBASIC5.48□□□□□ -1.53
PDS5AQ29RF7 UBE2V1P15-201ENST00000407776 448 ntBASIC5.48□□□□□ -1.53
PDS5AQ29RF7 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 RPL36AP10-201ENST00000421785 322 ntBASIC5.48□□□□□ -1.53
PDS5AQ29RF7 MTND2P9-201ENST00000422293 931 ntBASIC5.48□□□□□ -1.53
PDS5AQ29RF7 HSFY1P1-201ENST00000423928 1178 ntBASIC5.48□□□□□ -1.53
PDS5AQ29RF7 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 CBX1P1-201ENST00000440184 427 ntBASIC5.48□□□□□ -1.53
PDS5AQ29RF7 MTND5P8-201ENST00000449817 1083 ntBASIC5.48□□□□□ -1.53
PDS5AQ29RF7 C1DP3-201ENST00000455013 423 ntBASIC5.48□□□□□ -1.53
PDS5AQ29RF7 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 RPL21P126-201ENST00000470049 478 ntBASIC5.48□□□□□ -1.53
PDS5AQ29RF7 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 RNU6-760P-201ENST00000516078 97 ntBASIC5.48□□□□□ -1.53
PDS5AQ29RF7 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 AP003049.1-201ENST00000529418 457 ntBASIC5.48□□□□□ -1.53
PDS5AQ29RF7 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 VN1R81P-201ENST00000602085 372 ntBASIC5.48□□□□□ -1.53
PDS5AQ29RF7 AC005962.2-201ENST00000611427 652 ntBASIC5.48□□□□□ -1.53
PDS5AQ29RF7 AC006065.6-201ENST00000625201 545 ntBASIC5.48□□□□□ -1.53
PDS5AQ29RF7 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.48□□□□□ -1.53
PDS5AQ29RF7 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.47□□□□□ -1.53
PDS5AQ29RF7 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.47□□□□□ -1.53
PDS5AQ29RF7 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDS5AQ29RF7 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDS5AQ29RF7 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.47□□□□□ -1.53
PDS5AQ29RF7 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.47□□□□□ -1.53
PDS5AQ29RF7 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PDS5AQ29RF7 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PDS5AQ29RF7 OR5P1P-201ENST00000299512 925 ntBASIC5.47□□□□□ -1.53
PDS5AQ29RF7 RNU1-130P-201ENST00000363930 160 ntBASIC5.47□□□□□ -1.53
PDS5AQ29RF7 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDS5AQ29RF7 MIR921-201ENST00000401133 56 ntBASIC5.47□□□□□ -1.53
PDS5AQ29RF7 NPM1P38-201ENST00000403835 865 ntBASIC5.47□□□□□ -1.53
PDS5AQ29RF7 AL359643.1-201ENST00000404109 423 ntBASIC5.47□□□□□ -1.53
PDS5AQ29RF7 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PDS5AQ29RF7 MIR1271-201ENST00000408537 86 ntBASIC5.47□□□□□ -1.53
PDS5AQ29RF7 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.47□□□□□ -1.53
PDS5AQ29RF7 Z74021.1-201ENST00000423610 407 ntBASIC5.47□□□□□ -1.53
PDS5AQ29RF7 AC234779.1-201ENST00000425910 285 ntBASIC5.47□□□□□ -1.53
PDS5AQ29RF7 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.47□□□□□ -1.53
PDS5AQ29RF7 RPL34P6-201ENST00000432390 345 ntBASIC5.47□□□□□ -1.53
PDS5AQ29RF7 AL392003.1-201ENST00000434394 243 ntBASIC5.47□□□□□ -1.53
PDS5AQ29RF7 AC073143.1-201ENST00000436316 395 ntBASIC5.47□□□□□ -1.53
PDS5AQ29RF7 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.47□□□□□ -1.53
PDS5AQ29RF7 FHP1-201ENST00000442741 703 ntBASIC5.47□□□□□ -1.53
PDS5AQ29RF7 AL353718.1-201ENST00000451028 517 ntBASIC5.47□□□□□ -1.53
PDS5AQ29RF7 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.47□□□□□ -1.53
PDS5AQ29RF7 RN7SL98P-201ENST00000462271 300 ntBASIC5.47□□□□□ -1.53
PDS5AQ29RF7 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PDS5AQ29RF7 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.47□□□□□ -1.53
PDS5AQ29RF7 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.47□□□□□ -1.53
PDS5AQ29RF7 AC093840.1-201ENST00000511599 336 ntBASIC5.47□□□□□ -1.53
PDS5AQ29RF7 AC108043.1-201ENST00000512696 574 ntBASIC5.47□□□□□ -1.53
PDS5AQ29RF7 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PDS5AQ29RF7 OR7M1P-201ENST00000608946 533 ntBASIC5.47□□□□□ -1.53
PDS5AQ29RF7 AC241377.1-201ENST00000619797 406 ntBASIC5.47□□□□□ -1.53
PDS5AQ29RF7 AC006249.1-201ENST00000621223 471 ntBASIC5.47□□□□□ -1.53
PDS5AQ29RF7 AC015871.5-202ENST00000623252 701 ntBASIC5.47□□□□□ -1.53
PDS5AQ29RF7 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PDS5AQ29RF7 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PDS5AQ29RF7 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.46□□□□□ -1.53
PDS5AQ29RF7 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
PDS5AQ29RF7 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.53
PDS5AQ29RF7 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.46□□□□□ -1.53
PDS5AQ29RF7 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.53
PDS5AQ29RF7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
PDS5AQ29RF7 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDS5AQ29RF7 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms