Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LSM6P62312 AC016180.1-201ENST00000567945 403 ntBASIC4.04□□□□□ -1.76
LSM6P62312 AC027455.1-201ENST00000574104 594 ntBASIC4.04□□□□□ -1.76
LSM6P62312 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.04□□□□□ -1.76
LSM6P62312 ADAD1P2-201ENST00000588476 646 ntBASIC4.04□□□□□ -1.76
LSM6P62312 ELOCP28-201ENST00000590044 317 ntBASIC4.04□□□□□ -1.76
LSM6P62312 AC015813.4-201ENST00000610469 179 ntBASIC4.04□□□□□ -1.76
LSM6P62312 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.04□□□□□ -1.76
LSM6P62312 MIR6719-201ENST00000622428 87 ntBASIC4.04□□□□□ -1.76
LSM6P62312 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.04□□□□□ -1.76
LSM6P62312 AC108467.2-201ENST00000617640 1597 ntBASIC4.04□□□□□ -1.76
LSM6P62312 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.04□□□□□ -1.76
LSM6P62312 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
LSM6P62312 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
LSM6P62312 AC027290.2-201ENST00000623210 18662 ntBASIC4.04□□□□□ -1.76
LSM6P62312 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LSM6P62312 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LSM6P62312 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.04□□□□□ -1.76
LSM6P62312 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LSM6P62312 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LSM6P62312 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.04□□□□□ -1.76
LSM6P62312 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LSM6P62312 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.03□□□□□ -1.76
LSM6P62312 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LSM6P62312 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LSM6P62312 OR10AB1P-202ENST00000641219 1686 ntBASIC4.03□□□□□ -1.76
LSM6P62312 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LSM6P62312 AL592437.2-201ENST00000421655 2434 ntBASIC4.03□□□□□ -1.76
LSM6P62312 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LSM6P62312 A2MP1-204ENST00000566278 4130 ntBASIC4.03□□□□□ -1.76
LSM6P62312 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.03□□□□□ -1.76
LSM6P62312 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
LSM6P62312 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
LSM6P62312 MIR298-201ENST00000401212 88 ntBASIC4.03□□□□□ -1.76
LSM6P62312 RN7SKP278-201ENST00000410504 342 ntBASIC4.03□□□□□ -1.76
LSM6P62312 AC104837.2-201ENST00000427236 424 ntBASIC4.03□□□□□ -1.76
LSM6P62312 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.03□□□□□ -1.76
LSM6P62312 AC008072.1-201ENST00000434254 824 ntBASIC4.03□□□□□ -1.76
LSM6P62312 RPL7P61-201ENST00000451721 751 ntBASIC4.03□□□□□ -1.76
LSM6P62312 ATP5G1P3-201ENST00000463301 410 ntBASIC4.03□□□□□ -1.76
LSM6P62312 AP002371.1-201ENST00000463604 433 ntBASIC4.03□□□□□ -1.76
LSM6P62312 RN7SL41P-201ENST00000476144 297 ntBASIC4.03□□□□□ -1.76
LSM6P62312 VWA8P1-201ENST00000510889 176 ntBASIC4.03□□□□□ -1.76
LSM6P62312 RNA5SP497-201ENST00000516081 97 ntBASIC4.03□□□□□ -1.76
LSM6P62312 AC090515.3-201ENST00000560431 315 ntBASIC4.03□□□□□ -1.76
LSM6P62312 AC018552.3-201ENST00000567416 561 ntBASIC4.03□□□□□ -1.76
LSM6P62312 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.03□□□□□ -1.76
LSM6P62312 AC123786.2-201ENST00000603459 275 ntBASIC4.03□□□□□ -1.76
LSM6P62312 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.03□□□□□ -1.76
LSM6P62312 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.03□□□□□ -1.76
LSM6P62312 AC091979.2-201ENST00000607514 214 ntBASIC4.03□□□□□ -1.76
LSM6P62312 AC116447.1-201ENST00000613153 453 ntBASIC4.03□□□□□ -1.76
LSM6P62312 AL445528.2-201ENST00000620582 470 ntBASIC4.03□□□□□ -1.76
LSM6P62312 AC091905.2-201ENST00000623143 306 ntBASIC4.03□□□□□ -1.76
LSM6P62312 MIR6715B-201ENST00000637172 77 ntBASIC4.03□□□□□ -1.76
LSM6P62312 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
LSM6P62312 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LSM6P62312 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
LSM6P62312 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.03□□□□□ -1.76
LSM6P62312 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LSM6P62312 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
LSM6P62312 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.77
LSM6P62312 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.02□□□□□ -1.77
LSM6P62312 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
LSM6P62312 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LSM6P62312 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LSM6P62312 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LSM6P62312 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LSM6P62312 RNU1-20P-201ENST00000363314 162 ntBASIC4.02□□□□□ -1.77
LSM6P62312 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.02□□□□□ -1.77
LSM6P62312 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
LSM6P62312 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LSM6P62312 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.02□□□□□ -1.77
LSM6P62312 AC062016.2-201ENST00000420950 676 ntBASIC4.02□□□□□ -1.77
LSM6P62312 RAD23BP1-201ENST00000421404 1227 ntBASIC4.02□□□□□ -1.77
LSM6P62312 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.02□□□□□ -1.77
LSM6P62312 PA2G4P6-201ENST00000438325 1197 ntBASIC4.02□□□□□ -1.77
LSM6P62312 AC069285.2-201ENST00000440210 275 ntBASIC4.02□□□□□ -1.77
LSM6P62312 AC037198.2-201ENST00000478845 733 ntBASIC4.02□□□□□ -1.77
LSM6P62312 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.02□□□□□ -1.77
LSM6P62312 IGLV2-34-201ENST00000490007 283 ntBASIC4.02□□□□□ -1.77
LSM6P62312 MTND4LP2-201ENST00000502312 285 ntBASIC4.02□□□□□ -1.77
LSM6P62312 OR51K1P-201ENST00000510214 950 ntBASIC4.02□□□□□ -1.77
LSM6P62312 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LSM6P62312 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.02□□□□□ -1.77
LSM6P62312 AC090151.1-201ENST00000520784 730 ntBASIC4.02□□□□□ -1.77
LSM6P62312 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.02□□□□□ -1.77
LSM6P62312 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LSM6P62312 OR5D15P-201ENST00000531671 942 ntBASIC4.02□□□□□ -1.77
LSM6P62312 OR8X1P-201ENST00000534542 869 ntBASIC4.02□□□□□ -1.77
LSM6P62312 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.02□□□□□ -1.77
LSM6P62312 GSTP1P1-201ENST00000548078 319 ntBASIC4.02□□□□□ -1.77
LSM6P62312 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.02□□□□□ -1.77
LSM6P62312 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.02□□□□□ -1.77
LSM6P62312 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.02□□□□□ -1.77
LSM6P62312 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.02□□□□□ -1.77
LSM6P62312 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.02□□□□□ -1.77
LSM6P62312 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.02□□□□□ -1.77
LSM6P62312 BPIFA4P-203ENST00000603168 689 ntBASIC4.02□□□□□ -1.77
LSM6P62312 AL133338.2-201ENST00000604292 736 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms