Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RPL23AP61-201ENST00000623642 466 ntBASIC4.07□□□□□ -1.76
LMO4P61968 AC079298.2-201ENST00000623885 459 ntBASIC4.07□□□□□ -1.76
LMO4P61968 AC026422.1-201ENST00000623961 452 ntBASIC4.07□□□□□ -1.76
LMO4P61968 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LMO4P61968 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC4.07□□□□□ -1.76
LMO4P61968 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LMO4P61968 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
LMO4P61968 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.07□□□□□ -1.76
LMO4P61968 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.07□□□□□ -1.76
LMO4P61968 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LMO4P61968 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LMO4P61968 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC4.07□□□□□ -1.76
LMO4P61968 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LMO4P61968 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC4.07□□□□□ -1.76
LMO4P61968 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LMO4P61968 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LMO4P61968 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.07□□□□□ -1.76
LMO4P61968 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LMO4P61968 AC017002.4-201ENST00000604721 1525 ntBASIC4.06□□□□□ -1.76
LMO4P61968 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LMO4P61968 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LMO4P61968 NCLP2-201ENST00000416078 1462 ntBASIC4.06□□□□□ -1.76
LMO4P61968 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
LMO4P61968 HSPA8P17-201ENST00000427029 1382 ntBASIC4.06□□□□□ -1.76
LMO4P61968 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LMO4P61968 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
LMO4P61968 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.06□□□□□ -1.76
LMO4P61968 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LMO4P61968 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
LMO4P61968 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.06□□□□□ -1.76
LMO4P61968 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LMO4P61968 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.06□□□□□ -1.76
LMO4P61968 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LMO4P61968 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LMO4P61968 AL357515.1-201ENST00000402967 542 ntBASIC4.06□□□□□ -1.76
LMO4P61968 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.06□□□□□ -1.76
LMO4P61968 AC114755.2-201ENST00000413520 361 ntBASIC4.06□□□□□ -1.76
LMO4P61968 TBCAP2-201ENST00000416175 326 ntBASIC4.06□□□□□ -1.76
LMO4P61968 AC005005.2-201ENST00000420779 380 ntBASIC4.06□□□□□ -1.76
LMO4P61968 OR2X1P-201ENST00000421144 687 ntBASIC4.06□□□□□ -1.76
LMO4P61968 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.06□□□□□ -1.76
LMO4P61968 MORF4L1P7-201ENST00000426038 703 ntBASIC4.06□□□□□ -1.76
LMO4P61968 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LMO4P61968 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.06□□□□□ -1.76
LMO4P61968 OR2B7P-201ENST00000429302 934 ntBASIC4.06□□□□□ -1.76
LMO4P61968 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.06□□□□□ -1.76
LMO4P61968 AL359265.2-201ENST00000434367 631 ntBASIC4.06□□□□□ -1.76
LMO4P61968 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.06□□□□□ -1.76
LMO4P61968 MTND2P21-201ENST00000436242 1042 ntBASIC4.06□□□□□ -1.76
LMO4P61968 AC005154.2-201ENST00000438110 379 ntBASIC4.06□□□□□ -1.76
LMO4P61968 CACYBPP1-201ENST00000438592 684 ntBASIC4.06□□□□□ -1.76
LMO4P61968 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.06□□□□□ -1.76
LMO4P61968 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.06□□□□□ -1.76
LMO4P61968 AC009220.1-201ENST00000451614 275 ntBASIC4.06□□□□□ -1.76
LMO4P61968 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.06□□□□□ -1.76
LMO4P61968 AC096741.1-201ENST00000472250 846 ntBASIC4.06□□□□□ -1.76
LMO4P61968 RN7SL860P-201ENST00000473738 223 ntBASIC4.06□□□□□ -1.76
LMO4P61968 RN7SL459P-201ENST00000481078 302 ntBASIC4.06□□□□□ -1.76
LMO4P61968 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.06□□□□□ -1.76
LMO4P61968 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.06□□□□□ -1.76
LMO4P61968 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.06□□□□□ -1.76
LMO4P61968 RPL23AP72-201ENST00000492447 435 ntBASIC4.06□□□□□ -1.76
LMO4P61968 CEACAMP10-202ENST00000495431 496 ntBASIC4.06□□□□□ -1.76
LMO4P61968 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
LMO4P61968 MTCYBP35-201ENST00000503630 1137 ntBASIC4.06□□□□□ -1.76
LMO4P61968 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.06□□□□□ -1.76
LMO4P61968 AC112673.1-201ENST00000513168 575 ntBASIC4.06□□□□□ -1.76
LMO4P61968 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.06□□□□□ -1.76
LMO4P61968 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.06□□□□□ -1.76
LMO4P61968 AC021451.1-201ENST00000523498 1129 ntBASIC4.06□□□□□ -1.76
LMO4P61968 OSBPL9P3-201ENST00000534523 595 ntBASIC4.06□□□□□ -1.76
LMO4P61968 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.06□□□□□ -1.76
LMO4P61968 AC135279.1-201ENST00000543493 504 ntBASIC4.06□□□□□ -1.76
LMO4P61968 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.06□□□□□ -1.76
LMO4P61968 AC233266.2-201ENST00000567067 528 ntBASIC4.06□□□□□ -1.76
LMO4P61968 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.06□□□□□ -1.76
LMO4P61968 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.06□□□□□ -1.76
LMO4P61968 AC008751.2-201ENST00000597885 980 ntBASIC4.06□□□□□ -1.76
LMO4P61968 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.06□□□□□ -1.76
LMO4P61968 AC025165.5-201ENST00000602802 578 ntBASIC4.06□□□□□ -1.76
LMO4P61968 AC008745.1-201ENST00000604064 271 ntBASIC4.06□□□□□ -1.76
LMO4P61968 AC064807.4-201ENST00000607201 407 ntBASIC4.06□□□□□ -1.76
LMO4P61968 AC010424.2-201ENST00000607594 443 ntBASIC4.06□□□□□ -1.76
LMO4P61968 AC079395.3-201ENST00000615161 484 ntBASIC4.06□□□□□ -1.76
LMO4P61968 AC091932.2-201ENST00000623014 291 ntBASIC4.06□□□□□ -1.76
LMO4P61968 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
LMO4P61968 AP003399.1-201ENST00000637534 361 ntBASIC4.06□□□□□ -1.76
LMO4P61968 AC068137.4-201ENST00000638485 296 ntBASIC4.06□□□□□ -1.76
LMO4P61968 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LMO4P61968 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
LMO4P61968 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LMO4P61968 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LMO4P61968 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.06□□□□□ -1.76
LMO4P61968 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.06□□□□□ -1.76
LMO4P61968 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
LMO4P61968 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.06□□□□□ -1.76
LMO4P61968 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.06□□□□□ -1.76
LMO4P61968 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.06□□□□□ -1.76
LMO4P61968 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.06□□□□□ -1.76
LMO4P61968 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms