Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VSX2P58304 KARSP3-201ENST00000571212 1504 ntBASIC4.37□□□□□ -1.71
VSX2P58304 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.37□□□□□ -1.71
VSX2P58304 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VSX2P58304 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VSX2P58304 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VSX2P58304 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VSX2P58304 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VSX2P58304 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.37□□□□□ -1.71
VSX2P58304 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.37□□□□□ -1.71
VSX2P58304 AC009480.2-201ENST00000422916 432 ntBASIC4.37□□□□□ -1.71
VSX2P58304 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.37□□□□□ -1.71
VSX2P58304 RPEP3-201ENST00000425462 676 ntBASIC4.37□□□□□ -1.71
VSX2P58304 RPL23AP1-201ENST00000428990 471 ntBASIC4.37□□□□□ -1.71
VSX2P58304 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.37□□□□□ -1.71
VSX2P58304 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.37□□□□□ -1.71
VSX2P58304 RAB9AP5-201ENST00000437794 597 ntBASIC4.37□□□□□ -1.71
VSX2P58304 YWHAZP2-201ENST00000440317 728 ntBASIC4.37□□□□□ -1.71
VSX2P58304 RPL23AP93-201ENST00000440847 484 ntBASIC4.37□□□□□ -1.71
VSX2P58304 HMGB3P9-201ENST00000441799 583 ntBASIC4.37□□□□□ -1.71
VSX2P58304 RAB9AP2-201ENST00000443911 597 ntBASIC4.37□□□□□ -1.71
VSX2P58304 RN7SL481P-201ENST00000477764 299 ntBASIC4.37□□□□□ -1.71
VSX2P58304 AC098583.1-201ENST00000480875 255 ntBASIC4.37□□□□□ -1.71
VSX2P58304 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VSX2P58304 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.37□□□□□ -1.71
VSX2P58304 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.37□□□□□ -1.71
VSX2P58304 AC134698.5-201ENST00000519444 336 ntBASIC4.37□□□□□ -1.71
VSX2P58304 RAB9BP1-201ENST00000519581 626 ntBASIC4.37□□□□□ -1.71
VSX2P58304 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
VSX2P58304 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.37□□□□□ -1.71
VSX2P58304 MIR4675-201ENST00000577898 77 ntBASIC4.37□□□□□ -1.71
VSX2P58304 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.37□□□□□ -1.71
VSX2P58304 RPL12P25-202ENST00000598100 674 ntBASIC4.37□□□□□ -1.71
VSX2P58304 AP003499.2-201ENST00000624100 483 ntBASIC4.37□□□□□ -1.71
VSX2P58304 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
VSX2P58304 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.37□□□□□ -1.71
VSX2P58304 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
VSX2P58304 AC108751.5-201ENST00000492880 1336 ntBASIC4.37□□□□□ -1.71
VSX2P58304 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VSX2P58304 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VSX2P58304 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.37□□□□□ -1.71
VSX2P58304 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.37□□□□□ -1.71
VSX2P58304 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.37□□□□□ -1.71
VSX2P58304 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VSX2P58304 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
VSX2P58304 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.37□□□□□ -1.71
VSX2P58304 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VSX2P58304 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
VSX2P58304 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
VSX2P58304 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
VSX2P58304 AC092435.4-201ENST00000623012 4159 ntBASIC4.36□□□□□ -1.71
VSX2P58304 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VSX2P58304 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.36□□□□□ -1.71
VSX2P58304 DHX9P1-201ENST00000436565 3076 ntBASIC4.36□□□□□ -1.71
VSX2P58304 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.36□□□□□ -1.71
VSX2P58304 IL6STP1-201ENST00000346911 1020 ntBASIC4.36□□□□□ -1.71
VSX2P58304 RNU1-83P-201ENST00000363426 164 ntBASIC4.36□□□□□ -1.71
VSX2P58304 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.36□□□□□ -1.71
VSX2P58304 RNU1-32P-201ENST00000363937 159 ntBASIC4.36□□□□□ -1.71
VSX2P58304 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VSX2P58304 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
VSX2P58304 MIR659-201ENST00000384963 97 ntBASIC4.36□□□□□ -1.71
VSX2P58304 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
VSX2P58304 VN1R31P-201ENST00000417498 730 ntBASIC4.36□□□□□ -1.71
VSX2P58304 AL121578.1-201ENST00000428051 892 ntBASIC4.36□□□□□ -1.71
VSX2P58304 CNOT7P1-201ENST00000429006 852 ntBASIC4.36□□□□□ -1.71
VSX2P58304 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.36□□□□□ -1.71
VSX2P58304 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.36□□□□□ -1.71
VSX2P58304 TXNP2-201ENST00000443918 295 ntBASIC4.36□□□□□ -1.71
VSX2P58304 AC073587.1-201ENST00000447093 876 ntBASIC4.36□□□□□ -1.71
VSX2P58304 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.36□□□□□ -1.71
VSX2P58304 AC239798.3-201ENST00000454459 408 ntBASIC4.36□□□□□ -1.71
VSX2P58304 EIF2S2P5-201ENST00000457635 968 ntBASIC4.36□□□□□ -1.71
VSX2P58304 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.36□□□□□ -1.71
VSX2P58304 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.36□□□□□ -1.71
VSX2P58304 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
VSX2P58304 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
VSX2P58304 AC021146.3-201ENST00000511911 260 ntBASIC4.36□□□□□ -1.71
VSX2P58304 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.36□□□□□ -1.71
VSX2P58304 RNA5SP360-201ENST00000516555 118 ntBASIC4.36□□□□□ -1.71
VSX2P58304 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.36□□□□□ -1.71
VSX2P58304 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.36□□□□□ -1.71
VSX2P58304 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VSX2P58304 AC025423.2-201ENST00000537570 439 ntBASIC4.36□□□□□ -1.71
VSX2P58304 AC011270.1-201ENST00000558606 583 ntBASIC4.36□□□□□ -1.71
VSX2P58304 AC084783.1-201ENST00000565846 910 ntBASIC4.36□□□□□ -1.71
VSX2P58304 MIR4715-201ENST00000584117 79 ntBASIC4.36□□□□□ -1.71
VSX2P58304 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.36□□□□□ -1.71
VSX2P58304 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.36□□□□□ -1.71
VSX2P58304 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.36□□□□□ -1.71
VSX2P58304 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.36□□□□□ -1.71
VSX2P58304 AC097505.1-201ENST00000610199 565 ntBASIC4.36□□□□□ -1.71
VSX2P58304 AP005212.4-201ENST00000614206 710 ntBASIC4.36□□□□□ -1.71
VSX2P58304 AP005019.3-201ENST00000620418 560 ntBASIC4.36□□□□□ -1.71
VSX2P58304 AC002044.3-201ENST00000623314 541 ntBASIC4.36□□□□□ -1.71
VSX2P58304 LINC01808-202ENST00000641680 1116 ntBASIC4.36□□□□□ -1.71
VSX2P58304 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VSX2P58304 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VSX2P58304 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VSX2P58304 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms