Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC009127.1-201ENST00000467090 155 ntBASIC4.58□□□□□ -1.68
CDH11P55287 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.58□□□□□ -1.68
CDH11P55287 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH11P55287 AC073358.1-201ENST00000505671 684 ntBASIC4.58□□□□□ -1.68
CDH11P55287 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH11P55287 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH11P55287 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH11P55287 ENPP7P9-201ENST00000514456 627 ntBASIC4.58□□□□□ -1.68
CDH11P55287 RN7SKP46-201ENST00000515942 234 ntBASIC4.58□□□□□ -1.68
CDH11P55287 RN7SKP66-201ENST00000516681 231 ntBASIC4.58□□□□□ -1.68
CDH11P55287 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH11P55287 AC010476.1-201ENST00000519111 851 ntBASIC4.58□□□□□ -1.68
CDH11P55287 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.58□□□□□ -1.68
CDH11P55287 AC013701.1-201ENST00000522657 465 ntBASIC4.58□□□□□ -1.68
CDH11P55287 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.58□□□□□ -1.68
CDH11P55287 AP001372.4-201ENST00000524889 472 ntBASIC4.58□□□□□ -1.68
CDH11P55287 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CDH11P55287 AC092490.3-201ENST00000545370 572 ntBASIC4.58□□□□□ -1.68
CDH11P55287 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH11P55287 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.58□□□□□ -1.68
CDH11P55287 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.58□□□□□ -1.68
CDH11P55287 AC091057.3-201ENST00000602684 733 ntBASIC4.58□□□□□ -1.68
CDH11P55287 VN1R9P-201ENST00000614184 867 ntBASIC4.58□□□□□ -1.68
CDH11P55287 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.58□□□□□ -1.68
CDH11P55287 RNU6-368P-201ENST00000620928 107 ntBASIC4.58□□□□□ -1.68
CDH11P55287 RNU6-538P-201ENST00000622329 107 ntBASIC4.58□□□□□ -1.68
CDH11P55287 AC135068.12-201ENST00000637370 931 ntBASIC4.58□□□□□ -1.68
CDH11P55287 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CDH11P55287 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.58□□□□□ -1.68
CDH11P55287 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDH11P55287 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDH11P55287 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDH11P55287 MAPK10-320ENST00000641462 6696 ntBASIC4.58□□□□□ -1.68
CDH11P55287 AC126323.6-202ENST00000568092 3511 ntBASIC4.58□□□□□ -1.68
CDH11P55287 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.58□□□□□ -1.68
CDH11P55287 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDH11P55287 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDH11P55287 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDH11P55287 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDH11P55287 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.57□□□□□ -1.68
CDH11P55287 AC073429.2-201ENST00000569694 1444 ntBASIC4.57□□□□□ -1.68
CDH11P55287 HSPA8P18-201ENST00000439846 1928 ntBASIC4.57□□□□□ -1.68
CDH11P55287 RNA5SP305-201ENST00000362665 119 ntBASIC4.57□□□□□ -1.68
CDH11P55287 U3.3-201ENST00000362986 216 ntBASIC4.57□□□□□ -1.68
CDH11P55287 AL589647.1-201ENST00000402485 466 ntBASIC4.57□□□□□ -1.68
CDH11P55287 RPL5P19-201ENST00000404228 893 ntBASIC4.57□□□□□ -1.68
CDH11P55287 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.57□□□□□ -1.68
CDH11P55287 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CDH11P55287 RN7SKP125-201ENST00000410481 302 ntBASIC4.57□□□□□ -1.68
CDH11P55287 AC093162.1-201ENST00000419682 124 ntBASIC4.57□□□□□ -1.68
CDH11P55287 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.57□□□□□ -1.68
CDH11P55287 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.57□□□□□ -1.68
CDH11P55287 MTCO1P43-201ENST00000431831 488 ntBASIC4.57□□□□□ -1.68
CDH11P55287 AC069540.1-201ENST00000446320 988 ntBASIC4.57□□□□□ -1.68
CDH11P55287 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.57□□□□□ -1.68
CDH11P55287 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.57□□□□□ -1.68
CDH11P55287 SBDSP1-204ENST00000453858 737 ntBASIC4.57□□□□□ -1.68
CDH11P55287 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CDH11P55287 RN7SL441P-201ENST00000492388 296 ntBASIC4.57□□□□□ -1.68
CDH11P55287 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.57□□□□□ -1.68
CDH11P55287 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.57□□□□□ -1.68
CDH11P55287 TPT1P8-201ENST00000510120 555 ntBASIC4.57□□□□□ -1.68
CDH11P55287 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.57□□□□□ -1.68
CDH11P55287 AC110760.3-202ENST00000515177 371 ntBASIC4.57□□□□□ -1.68
CDH11P55287 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.57□□□□□ -1.68
CDH11P55287 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.57□□□□□ -1.68
CDH11P55287 OR8X1P-201ENST00000534542 869 ntBASIC4.57□□□□□ -1.68
CDH11P55287 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.57□□□□□ -1.68
CDH11P55287 AL049830.4-201ENST00000555149 351 ntBASIC4.57□□□□□ -1.68
CDH11P55287 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.57□□□□□ -1.68
CDH11P55287 AC116553.2-201ENST00000564203 463 ntBASIC4.57□□□□□ -1.68
CDH11P55287 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.57□□□□□ -1.68
CDH11P55287 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.57□□□□□ -1.68
CDH11P55287 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.57□□□□□ -1.68
CDH11P55287 BNIP3P32-201ENST00000600015 554 ntBASIC4.57□□□□□ -1.68
CDH11P55287 AC090912.3-201ENST00000609775 533 ntBASIC4.57□□□□□ -1.68
CDH11P55287 MIR8069-1-201ENST00000616627 86 ntBASIC4.57□□□□□ -1.68
CDH11P55287 AC078880.5-201ENST00000617845 421 ntBASIC4.57□□□□□ -1.68
CDH11P55287 MIR8069-2-201ENST00000621412 86 ntBASIC4.57□□□□□ -1.68
CDH11P55287 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.57□□□□□ -1.68
CDH11P55287 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.57□□□□□ -1.68
CDH11P55287 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CDH11P55287 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDH11P55287 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDH11P55287 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.57□□□□□ -1.68
CDH11P55287 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDH11P55287 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDH11P55287 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CDH11P55287 MTCO1P15-201ENST00000529569 1526 ntBASIC4.56□□□□□ -1.68
CDH11P55287 AC131971.1-201ENST00000332881 1482 ntBASIC4.56□□□□□ -1.68
CDH11P55287 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH11P55287 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH11P55287 MAPK10-286ENST00000641208 8747 ntBASIC4.56□□□□□ -1.68
CDH11P55287 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH11P55287 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH11P55287 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH11P55287 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH11P55287 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CDH11P55287 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH11P55287 SNORD56.4-201ENST00000363883 71 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms