Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.69□□□□□ -1.66
CDH6P55285 BNIP3P32-201ENST00000600015 554 ntBASIC4.69□□□□□ -1.66
CDH6P55285 BPIFA4P-203ENST00000603168 689 ntBASIC4.69□□□□□ -1.66
CDH6P55285 AP002360.3-201ENST00000607673 710 ntBASIC4.69□□□□□ -1.66
CDH6P55285 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.69□□□□□ -1.66
CDH6P55285 AL592494.3-201ENST00000609485 464 ntBASIC4.69□□□□□ -1.66
CDH6P55285 AC015922.4-201ENST00000612568 690 ntBASIC4.69□□□□□ -1.66
CDH6P55285 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH6P55285 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH6P55285 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.69□□□□□ -1.66
CDH6P55285 AL356317.1-201ENST00000396110 1436 ntBASIC4.69□□□□□ -1.66
CDH6P55285 VN2R3P-201ENST00000422626 1412 ntBASIC4.69□□□□□ -1.66
CDH6P55285 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH6P55285 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH6P55285 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH6P55285 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.69□□□□□ -1.66
CDH6P55285 LINC00622-201ENST00000562811 1570 ntBASIC4.69□□□□□ -1.66
CDH6P55285 CPHL1P-201ENST00000461341 3407 ntBASIC4.69□□□□□ -1.66
CDH6P55285 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH6P55285 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDH6P55285 UGT2B26P-201ENST00000508672 1613 ntBASIC4.68□□□□□ -1.66
CDH6P55285 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH6P55285 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDH6P55285 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH6P55285 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH6P55285 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH6P55285 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDH6P55285 RNVU1-6-201ENST00000364688 164 ntBASIC4.68□□□□□ -1.66
CDH6P55285 MIR659-201ENST00000384963 97 ntBASIC4.68□□□□□ -1.66
CDH6P55285 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.68□□□□□ -1.66
CDH6P55285 RN7SKP199-201ENST00000410325 305 ntBASIC4.68□□□□□ -1.66
CDH6P55285 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH6P55285 AP000936.3-201ENST00000438127 255 ntBASIC4.68□□□□□ -1.66
CDH6P55285 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH6P55285 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH6P55285 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH6P55285 RAB28P3-201ENST00000448325 597 ntBASIC4.68□□□□□ -1.66
CDH6P55285 AC012671.1-201ENST00000451912 203 ntBASIC4.68□□□□□ -1.66
CDH6P55285 CEACAMP6-201ENST00000452007 574 ntBASIC4.68□□□□□ -1.66
CDH6P55285 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.68□□□□□ -1.66
CDH6P55285 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
CDH6P55285 RN7SL817P-201ENST00000480777 288 ntBASIC4.68□□□□□ -1.66
CDH6P55285 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH6P55285 RNA5SP360-201ENST00000516555 118 ntBASIC4.68□□□□□ -1.66
CDH6P55285 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CDH6P55285 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH6P55285 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CDH6P55285 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH6P55285 SLC25A36P1-201ENST00000590111 465 ntBASIC4.68□□□□□ -1.66
CDH6P55285 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH6P55285 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.68□□□□□ -1.66
CDH6P55285 AC068790.7-201ENST00000602347 528 ntBASIC4.68□□□□□ -1.66
CDH6P55285 AC023813.4-201ENST00000607580 580 ntBASIC4.68□□□□□ -1.66
CDH6P55285 uc_338.18-201ENST00000615451 175 ntBASIC4.68□□□□□ -1.66
CDH6P55285 AC009704.2-201ENST00000618739 483 ntBASIC4.68□□□□□ -1.66
CDH6P55285 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH6P55285 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CDH6P55285 LINC01808-202ENST00000641680 1116 ntBASIC4.68□□□□□ -1.66
CDH6P55285 OR51H2P-202ENST00000641424 3046 ntBASIC4.68□□□□□ -1.66
CDH6P55285 AL592182.3-201ENST00000642132 3304 ntBASIC4.68□□□□□ -1.66
CDH6P55285 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH6P55285 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDH6P55285 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.67□□□□□ -1.66
CDH6P55285 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH6P55285 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CDH6P55285 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH6P55285 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH6P55285 AC019155.1-201ENST00000382242 574 ntBASIC4.67□□□□□ -1.66
CDH6P55285 SNORA70F-201ENST00000384142 135 ntBASIC4.67□□□□□ -1.66
CDH6P55285 AC009237.10-201ENST00000414112 510 ntBASIC4.67□□□□□ -1.66
CDH6P55285 AC062016.2-201ENST00000420950 676 ntBASIC4.67□□□□□ -1.66
CDH6P55285 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.67□□□□□ -1.66
CDH6P55285 AC004448.2-201ENST00000422360 586 ntBASIC4.67□□□□□ -1.66
CDH6P55285 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH6P55285 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH6P55285 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH6P55285 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH6P55285 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH6P55285 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH6P55285 RPS27AP15-201ENST00000447672 466 ntBASIC4.67□□□□□ -1.66
CDH6P55285 AC073264.2-201ENST00000448886 166 ntBASIC4.67□□□□□ -1.66
CDH6P55285 AL162591.2-201ENST00000449634 317 ntBASIC4.67□□□□□ -1.66
CDH6P55285 RN7SL41P-201ENST00000476144 297 ntBASIC4.67□□□□□ -1.66
CDH6P55285 AC090013.1-201ENST00000485147 480 ntBASIC4.67□□□□□ -1.66
CDH6P55285 AP000926.3-201ENST00000497201 299 ntBASIC4.67□□□□□ -1.66
CDH6P55285 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH6P55285 CCNHP1-201ENST00000513311 678 ntBASIC4.67□□□□□ -1.66
CDH6P55285 RNA5SP228-201ENST00000516232 133 ntBASIC4.67□□□□□ -1.66
CDH6P55285 NPM1P6-201ENST00000521088 871 ntBASIC4.67□□□□□ -1.66
CDH6P55285 AP001781.1-201ENST00000530977 207 ntBASIC4.67□□□□□ -1.66
CDH6P55285 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH6P55285 SULT1C2P2-201ENST00000562517 294 ntBASIC4.67□□□□□ -1.66
CDH6P55285 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH6P55285 LINC00901.1-201ENST00000617252 152 ntBASIC4.67□□□□□ -1.66
CDH6P55285 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CDH6P55285 OR2L1P-202ENST00000641567 1023 ntBASIC4.67□□□□□ -1.66
CDH6P55285 AC006971.1-201ENST00000407916 4486 ntBASIC4.67□□□□□ -1.66
CDH6P55285 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH6P55285 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CDH6P55285 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms