Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
NUP98P52948 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NUP98P52948 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.3□□□□□ -1.56
NUP98P52948 RNU1-85P-201ENST00000364127 164 ntBASIC5.3□□□□□ -1.56
NUP98P52948 RNU1-44P-201ENST00000384453 163 ntBASIC5.3□□□□□ -1.56
NUP98P52948 MIR1911-201ENST00000410783 80 ntBASIC5.3□□□□□ -1.56
NUP98P52948 AL450992.3-201ENST00000413192 568 ntBASIC5.3□□□□□ -1.56
NUP98P52948 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.3□□□□□ -1.56
NUP98P52948 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.3□□□□□ -1.56
NUP98P52948 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.3□□□□□ -1.56
NUP98P52948 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.3□□□□□ -1.56
NUP98P52948 AC053481.4-201ENST00000583164 216 ntBASIC5.3□□□□□ -1.56
NUP98P52948 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
NUP98P52948 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.3□□□□□ -1.56
NUP98P52948 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NUP98P52948 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.3□□□□□ -1.56
NUP98P52948 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NUP98P52948 AL672167.1-203ENST00000641299 2975 ntBASIC5.3□□□□□ -1.56
NUP98P52948 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NUP98P52948 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NUP98P52948 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NUP98P52948 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.3□□□□□ -1.56
NUP98P52948 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
NUP98P52948 UBTFL3-201ENST00000418934 1024 ntBASIC5.3□□□□□ -1.56
NUP98P52948 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.3□□□□□ -1.56
NUP98P52948 ATP5G1P3-201ENST00000463301 410 ntBASIC5.3□□□□□ -1.56
NUP98P52948 UBTFL6-201ENST00000477929 1024 ntBASIC5.3□□□□□ -1.56
NUP98P52948 RN7SL817P-201ENST00000480777 288 ntBASIC5.3□□□□□ -1.56
NUP98P52948 PPM1AP1-201ENST00000502740 1135 ntBASIC5.3□□□□□ -1.56
NUP98P52948 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.3□□□□□ -1.56
NUP98P52948 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.3□□□□□ -1.56
NUP98P52948 YPEL5P3-201ENST00000547227 352 ntBASIC5.3□□□□□ -1.56
NUP98P52948 AC091905.2-201ENST00000623143 306 ntBASIC5.3□□□□□ -1.56
NUP98P52948 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
NUP98P52948 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
NUP98P52948 AL078604.1-201ENST00000404609 466 ntBASIC5.29□□□□□ -1.56
NUP98P52948 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NUP98P52948 NPM1P28-201ENST00000492269 840 ntBASIC5.29□□□□□ -1.56
NUP98P52948 AGGF1P6-201ENST00000569213 976 ntBASIC5.29□□□□□ -1.56
NUP98P52948 MIR4472-2-201ENST00000582069 67 ntBASIC5.29□□□□□ -1.56
NUP98P52948 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUP98P52948 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NUP98P52948 ERCC6-202ENST00000374127 1782 ntBASIC5.28□□□□□ -1.56
NUP98P52948 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
NUP98P52948 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NUP98P52948 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NUP98P52948 AL133268.1-201ENST00000405676 1401 ntBASIC5.28□□□□□ -1.56
NUP98P52948 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
NUP98P52948 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
NUP98P52948 AL356968.2-201ENST00000412769 1257 ntBASIC5.28□□□□□ -1.56
NUP98P52948 RPL36AP10-201ENST00000421785 322 ntBASIC5.28□□□□□ -1.56
NUP98P52948 AL358472.1-201ENST00000431295 329 ntBASIC5.28□□□□□ -1.56
NUP98P52948 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.28□□□□□ -1.56
NUP98P52948 RPS27AP15-201ENST00000447672 466 ntBASIC5.28□□□□□ -1.56
NUP98P52948 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.28□□□□□ -1.56
NUP98P52948 VN1R105P-201ENST00000486595 910 ntBASIC5.28□□□□□ -1.56
NUP98P52948 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.28□□□□□ -1.56
NUP98P52948 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.28□□□□□ -1.56
NUP98P52948 GTF2IP22-201ENST00000554443 182 ntBASIC5.28□□□□□ -1.56
NUP98P52948 AC027455.1-201ENST00000574104 594 ntBASIC5.28□□□□□ -1.56
NUP98P52948 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.28□□□□□ -1.56
NUP98P52948 AC110743.1-201ENST00000584870 478 ntBASIC5.28□□□□□ -1.56
NUP98P52948 AC010503.3-201ENST00000594355 540 ntBASIC5.28□□□□□ -1.56
NUP98P52948 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NUP98P52948 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
NUP98P52948 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NUP98P52948 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NUP98P52948 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
NUP98P52948 SNORA48.7-201ENST00000391302 135 ntBASIC5.27□□□□□ -1.57
NUP98P52948 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.27□□□□□ -1.57
NUP98P52948 AC090602.1-201ENST00000469695 252 ntBASIC5.27□□□□□ -1.57
NUP98P52948 DEFB109A-201ENST00000482450 265 ntBASIC5.27□□□□□ -1.57
NUP98P52948 SLC25A15P5-201ENST00000508033 253 ntBASIC5.27□□□□□ -1.57
NUP98P52948 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
NUP98P52948 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.27□□□□□ -1.57
NUP98P52948 DYNLL1P4-201ENST00000549314 266 ntBASIC5.27□□□□□ -1.57
NUP98P52948 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.27□□□□□ -1.57
NUP98P52948 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.27□□□□□ -1.57
NUP98P52948 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NUP98P52948 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.27□□□□□ -1.57
NUP98P52948 AC010608.2-201ENST00000624830 470 ntBASIC5.27□□□□□ -1.57
NUP98P52948 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NUP98P52948 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.27□□□□□ -1.57
NUP98P52948 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
NUP98P52948 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.27□□□□□ -1.57
NUP98P52948 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.27□□□□□ -1.57
NUP98P52948 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NUP98P52948 RNA5SP124-201ENST00000362739 110 ntBASIC5.27□□□□□ -1.57
NUP98P52948 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.27□□□□□ -1.57
NUP98P52948 EIF1P3-201ENST00000423841 334 ntBASIC5.27□□□□□ -1.57
NUP98P52948 HMGB3P5-201ENST00000428894 612 ntBASIC5.27□□□□□ -1.57
NUP98P52948 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.27□□□□□ -1.57
NUP98P52948 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.27□□□□□ -1.57
NUP98P52948 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.27□□□□□ -1.57
NUP98P52948 RPS11P1-201ENST00000451072 473 ntBASIC5.27□□□□□ -1.57
NUP98P52948 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.27□□□□□ -1.57
NUP98P52948 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.27□□□□□ -1.57
NUP98P52948 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.27□□□□□ -1.57
NUP98P52948 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.27□□□□□ -1.57
NUP98P52948 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms