Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLCN3P51790 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLCN3P51790 AP003102.1-201ENST00000525638 661 ntBASIC5.25□□□□□ -1.57
CLCN3P51790 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.25□□□□□ -1.57
CLCN3P51790 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CLCN3P51790 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.25□□□□□ -1.57
CLCN3P51790 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.25□□□□□ -1.57
CLCN3P51790 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.25□□□□□ -1.57
CLCN3P51790 AC105129.1-201ENST00000560250 297 ntBASIC5.25□□□□□ -1.57
CLCN3P51790 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.25□□□□□ -1.57
CLCN3P51790 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.25□□□□□ -1.57
CLCN3P51790 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.25□□□□□ -1.57
CLCN3P51790 BX005214.3-202ENST00000619809 325 ntBASIC5.25□□□□□ -1.57
CLCN3P51790 AP000648.2-201ENST00000624182 404 ntBASIC5.25□□□□□ -1.57
CLCN3P51790 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.25□□□□□ -1.57
CLCN3P51790 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.25□□□□□ -1.57
CLCN3P51790 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.25□□□□□ -1.57
CLCN3P51790 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLCN3P51790 AL442128.2-201ENST00000620246 1824 ntBASIC5.25□□□□□ -1.57
CLCN3P51790 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.25□□□□□ -1.57
CLCN3P51790 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLCN3P51790 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.25□□□□□ -1.57
CLCN3P51790 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CLCN3P51790 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLCN3P51790 AC026523.2-201ENST00000625039 7739 ntBASIC5.24□□□□□ -1.57
CLCN3P51790 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CLCN3P51790 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCN3P51790 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCN3P51790 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCN3P51790 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCN3P51790 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCN3P51790 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLCN3P51790 AC126755.2-208ENST00000327792 462 ntBASIC5.24□□□□□ -1.57
CLCN3P51790 AC138969.1-213ENST00000331436 462 ntBASIC5.24□□□□□ -1.57
CLCN3P51790 SNORA63.3-201ENST00000362682 132 ntBASIC5.24□□□□□ -1.57
CLCN3P51790 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCN3P51790 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCN3P51790 AL160175.1-201ENST00000428124 247 ntBASIC5.24□□□□□ -1.57
CLCN3P51790 AC068287.1-201ENST00000430283 295 ntBASIC5.24□□□□□ -1.57
CLCN3P51790 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLCN3P51790 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.24□□□□□ -1.57
CLCN3P51790 OR52A4P-201ENST00000472867 958 ntBASIC5.24□□□□□ -1.57
CLCN3P51790 AC092902.1-201ENST00000486999 259 ntBASIC5.24□□□□□ -1.57
CLCN3P51790 CEACAMP10-202ENST00000495431 496 ntBASIC5.24□□□□□ -1.57
CLCN3P51790 HAUS1P1-201ENST00000505275 832 ntBASIC5.24□□□□□ -1.57
CLCN3P51790 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.24□□□□□ -1.57
CLCN3P51790 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.24□□□□□ -1.57
CLCN3P51790 RN7SKP92-201ENST00000517266 244 ntBASIC5.24□□□□□ -1.57
CLCN3P51790 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.24□□□□□ -1.57
CLCN3P51790 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.24□□□□□ -1.57
CLCN3P51790 RPL23AP53-201ENST00000521854 457 ntBASIC5.24□□□□□ -1.57
CLCN3P51790 C1GALT1P3-201ENST00000522049 819 ntBASIC5.24□□□□□ -1.57
CLCN3P51790 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.24□□□□□ -1.57
CLCN3P51790 RN7SL652P-201ENST00000577769 300 ntBASIC5.24□□□□□ -1.57
CLCN3P51790 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.24□□□□□ -1.57
CLCN3P51790 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.24□□□□□ -1.57
CLCN3P51790 Z95327.3-201ENST00000610385 572 ntBASIC5.24□□□□□ -1.57
CLCN3P51790 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.24□□□□□ -1.57
CLCN3P51790 AC009452.1-201ENST00000640823 606 ntBASIC5.24□□□□□ -1.57
CLCN3P51790 AC073869.10-201ENST00000642016 354 ntBASIC5.24□□□□□ -1.57
CLCN3P51790 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CLCN3P51790 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCN3P51790 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLCN3P51790 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.24□□□□□ -1.57
CLCN3P51790 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.24□□□□□ -1.57
CLCN3P51790 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CLCN3P51790 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLCN3P51790 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCN3P51790 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CLCN3P51790 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.23□□□□□ -1.57
CLCN3P51790 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLCN3P51790 DHX40P1-201ENST00000588725 1412 ntBASIC5.23□□□□□ -1.57
CLCN3P51790 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.23□□□□□ -1.57
CLCN3P51790 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLCN3P51790 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CLCN3P51790 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLCN3P51790 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CLCN3P51790 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CLCN3P51790 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLCN3P51790 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLCN3P51790 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLCN3P51790 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLCN3P51790 AC136624.1-201ENST00000400791 413 ntBASIC5.23□□□□□ -1.57
CLCN3P51790 RPS3AP23-201ENST00000401762 784 ntBASIC5.23□□□□□ -1.57
CLCN3P51790 ATP5F1P6-201ENST00000402768 767 ntBASIC5.23□□□□□ -1.57
CLCN3P51790 RNU4-74P-201ENST00000411280 161 ntBASIC5.23□□□□□ -1.57
CLCN3P51790 AL591848.1-201ENST00000413092 322 ntBASIC5.23□□□□□ -1.57
CLCN3P51790 CENPIP1-201ENST00000425713 902 ntBASIC5.23□□□□□ -1.57
CLCN3P51790 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.23□□□□□ -1.57
CLCN3P51790 AL512637.2-201ENST00000431287 1256 ntBASIC5.23□□□□□ -1.57
CLCN3P51790 BX119904.1-201ENST00000432026 348 ntBASIC5.23□□□□□ -1.57
CLCN3P51790 NDUFA5P10-201ENST00000432147 357 ntBASIC5.23□□□□□ -1.57
CLCN3P51790 RPL35AP21-201ENST00000437667 333 ntBASIC5.23□□□□□ -1.57
CLCN3P51790 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.23□□□□□ -1.57
CLCN3P51790 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.23□□□□□ -1.57
CLCN3P51790 ARL2BPP10-201ENST00000446487 531 ntBASIC5.23□□□□□ -1.57
CLCN3P51790 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.23□□□□□ -1.57
CLCN3P51790 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.23□□□□□ -1.57
CLCN3P51790 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.23□□□□□ -1.57
CLCN3P51790 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms