Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 CDY12P-201ENST00000440679 1015 ntBASIC7.71□□□□□ -1.18
SMARCA2P51531 CDY13P-201ENST00000445813 1015 ntBASIC7.71□□□□□ -1.18
SMARCA2P51531 CDY23P-201ENST00000451661 1014 ntBASIC7.71□□□□□ -1.18
SMARCA2P51531 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SMARCA2P51531 ALG13-211ENST00000473389 693 ntTSL 2 BASIC7.71□□□□□ -1.18
SMARCA2P51531 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC7.71□□□□□ -1.18
SMARCA2P51531 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC7.71□□□□□ -1.18
SMARCA2P51531 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC7.71□□□□□ -1.18
SMARCA2P51531 AC011471.1-201ENST00000585766 187 ntBASIC7.71□□□□□ -1.18
SMARCA2P51531 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC7.71□□□□□ -1.18
SMARCA2P51531 AC008013.2-202ENST00000637965 364 ntBASIC7.71□□□□□ -1.18
SMARCA2P51531 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SMARCA2P51531 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SMARCA2P51531 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SMARCA2P51531 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SMARCA2P51531 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SMARCA2P51531 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SMARCA2P51531 AL359922.3-201ENST00000624779 1670 ntBASIC7.7□□□□□ -1.18
SMARCA2P51531 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC7.7□□□□□ -1.18
SMARCA2P51531 SNORA73.2-201ENST00000364946 201 ntBASIC7.7□□□□□ -1.18
SMARCA2P51531 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC7.7□□□□□ -1.18
SMARCA2P51531 RPEP2-201ENST00000432149 701 ntBASIC7.7□□□□□ -1.18
SMARCA2P51531 AL157385.1-201ENST00000446973 268 ntBASIC7.7□□□□□ -1.18
SMARCA2P51531 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SMARCA2P51531 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SMARCA2P51531 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC7.7□□□□□ -1.18
SMARCA2P51531 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC7.7□□□□□ -1.18
SMARCA2P51531 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC7.7□□□□□ -1.18
SMARCA2P51531 AC010201.1-201ENST00000605051 540 ntBASIC7.7□□□□□ -1.18
SMARCA2P51531 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SMARCA2P51531 AC020978.9-201ENST00000624380 1141 ntBASIC7.7□□□□□ -1.18
SMARCA2P51531 FP325313.1-201ENST00000638228 703 ntBASIC7.7□□□□□ -1.18
SMARCA2P51531 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC7.7□□□□□ -1.18
SMARCA2P51531 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SMARCA2P51531 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SMARCA2P51531 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.7□□□□□ -1.18
SMARCA2P51531 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC7.7□□□□□ -1.18
SMARCA2P51531 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC7.7□□□□□ -1.18
SMARCA2P51531 AL603750.1-201ENST00000624216 1717 ntBASIC7.69□□□□□ -1.18
SMARCA2P51531 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SMARCA2P51531 MIR133A2-201ENST00000347538 102 ntBASIC7.69□□□□□ -1.18
SMARCA2P51531 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
SMARCA2P51531 AL691449.1-201ENST00000426570 421 ntBASIC7.69□□□□□ -1.18
SMARCA2P51531 RPL21P91-201ENST00000429231 479 ntBASIC7.69□□□□□ -1.18
SMARCA2P51531 AC004938.1-201ENST00000438468 308 ntBASIC7.69□□□□□ -1.18
SMARCA2P51531 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC7.69□□□□□ -1.18
SMARCA2P51531 RNA5SP497-201ENST00000516081 97 ntBASIC7.69□□□□□ -1.18
SMARCA2P51531 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC7.69□□□□□ -1.18
SMARCA2P51531 AC107982.3-201ENST00000584957 985 ntBASIC7.69□□□□□ -1.18
SMARCA2P51531 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC7.69□□□□□ -1.18
SMARCA2P51531 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC7.69□□□□□ -1.18
SMARCA2P51531 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SMARCA2P51531 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.69□□□□□ -1.18
SMARCA2P51531 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SMARCA2P51531 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
SMARCA2P51531 AC007529.1-201ENST00000418574 2178 ntBASIC7.69□□□□□ -1.18
SMARCA2P51531 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SMARCA2P51531 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SMARCA2P51531 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SMARCA2P51531 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SMARCA2P51531 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SMARCA2P51531 AC073136.1-201ENST00000449426 2884 ntBASIC7.69□□□□□ -1.18
SMARCA2P51531 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SMARCA2P51531 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC7.69□□□□□ -1.18
SMARCA2P51531 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SMARCA2P51531 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SMARCA2P51531 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC7.68□□□□□ -1.18
SMARCA2P51531 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SMARCA2P51531 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
SMARCA2P51531 MIR200C-201ENST00000384980 68 ntBASIC7.68□□□□□ -1.18
SMARCA2P51531 RN7SKP177-201ENST00000410567 355 ntBASIC7.68□□□□□ -1.18
SMARCA2P51531 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC7.68□□□□□ -1.18
SMARCA2P51531 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC7.68□□□□□ -1.18
SMARCA2P51531 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC7.68□□□□□ -1.18
SMARCA2P51531 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC7.68□□□□□ -1.18
SMARCA2P51531 HSPE1P5-201ENST00000561489 272 ntBASIC7.68□□□□□ -1.18
SMARCA2P51531 MIR4660-201ENST00000583549 74 ntBASIC7.68□□□□□ -1.18
SMARCA2P51531 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC7.68□□□□□ -1.18
SMARCA2P51531 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC7.68□□□□□ -1.18
SMARCA2P51531 AL355852.1-201ENST00000454081 1771 ntBASIC7.68□□□□□ -1.18
SMARCA2P51531 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
SMARCA2P51531 CASC19-261ENST00000641853 1638 ntBASIC7.68□□□□□ -1.18
SMARCA2P51531 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SMARCA2P51531 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
SMARCA2P51531 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.68□□□□□ -1.18
SMARCA2P51531 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC7.67□□□□□ -1.18
SMARCA2P51531 AMMECR1LP1-201ENST00000415152 841 ntBASIC7.67□□□□□ -1.18
SMARCA2P51531 KRR1P1-201ENST00000419430 803 ntBASIC7.67□□□□□ -1.18
SMARCA2P51531 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC7.67□□□□□ -1.18
SMARCA2P51531 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC7.67□□□□□ -1.18
SMARCA2P51531 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC7.67□□□□□ -1.18
SMARCA2P51531 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC7.67□□□□□ -1.18
SMARCA2P51531 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC7.67□□□□□ -1.18
SMARCA2P51531 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC7.67□□□□□ -1.18
SMARCA2P51531 MIR6500-201ENST00000622700 86 ntBASIC7.67□□□□□ -1.18
SMARCA2P51531 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC7.67□□□□□ -1.18
SMARCA2P51531 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SMARCA2P51531 AL035425.3-201ENST00000564206 4996 ntBASIC7.67□□□□□ -1.18
SMARCA2P51531 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
SMARCA2P51531 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms