Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CSNK1A1P48729 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CSNK1A1P48729 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.13□□□□□ -1.75
CSNK1A1P48729 SPATA2P1-201ENST00000431223 2055 ntBASIC4.13□□□□□ -1.75
CSNK1A1P48729 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.13□□□□□ -1.75
CSNK1A1P48729 AC108467.2-201ENST00000617640 1597 ntBASIC4.13□□□□□ -1.75
CSNK1A1P48729 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CSNK1A1P48729 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CSNK1A1P48729 AC009313.2-201ENST00000417893 1941 ntBASIC4.13□□□□□ -1.75
CSNK1A1P48729 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CSNK1A1P48729 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CSNK1A1P48729 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CSNK1A1P48729 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.12□□□□□ -1.75
CSNK1A1P48729 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.12□□□□□ -1.75
CSNK1A1P48729 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CSNK1A1P48729 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.12□□□□□ -1.75
CSNK1A1P48729 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CSNK1A1P48729 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CSNK1A1P48729 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CSNK1A1P48729 AL590240.1-201ENST00000334118 313 ntBASIC4.12□□□□□ -1.75
CSNK1A1P48729 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CSNK1A1P48729 RPS24P12-201ENST00000402084 394 ntBASIC4.12□□□□□ -1.75
CSNK1A1P48729 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.12□□□□□ -1.75
CSNK1A1P48729 ATG4AP1-201ENST00000416893 538 ntBASIC4.12□□□□□ -1.75
CSNK1A1P48729 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CSNK1A1P48729 BRWD1P3-201ENST00000428816 390 ntBASIC4.12□□□□□ -1.75
CSNK1A1P48729 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.12□□□□□ -1.75
CSNK1A1P48729 GEMIN8P3-201ENST00000445417 720 ntBASIC4.12□□□□□ -1.75
CSNK1A1P48729 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.12□□□□□ -1.75
CSNK1A1P48729 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.12□□□□□ -1.75
CSNK1A1P48729 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CSNK1A1P48729 APOOP2-201ENST00000461561 539 ntBASIC4.12□□□□□ -1.75
CSNK1A1P48729 CCDC75P1-201ENST00000469247 791 ntBASIC4.12□□□□□ -1.75
CSNK1A1P48729 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.12□□□□□ -1.75
CSNK1A1P48729 AC104763.1-201ENST00000475274 360 ntBASIC4.12□□□□□ -1.75
CSNK1A1P48729 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.12□□□□□ -1.75
CSNK1A1P48729 LARP7P4-201ENST00000481075 878 ntBASIC4.12□□□□□ -1.75
CSNK1A1P48729 AC011005.3-201ENST00000491624 395 ntBASIC4.12□□□□□ -1.75
CSNK1A1P48729 RPL36AP41-201ENST00000493820 306 ntBASIC4.12□□□□□ -1.75
CSNK1A1P48729 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CSNK1A1P48729 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.12□□□□□ -1.75
CSNK1A1P48729 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.12□□□□□ -1.75
CSNK1A1P48729 AK4P6-201ENST00000505168 528 ntBASIC4.12□□□□□ -1.75
CSNK1A1P48729 MTCYBP19-201ENST00000517463 1124 ntBASIC4.12□□□□□ -1.75
CSNK1A1P48729 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.12□□□□□ -1.75
CSNK1A1P48729 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CSNK1A1P48729 AC087888.1-201ENST00000550884 1254 ntBASIC4.12□□□□□ -1.75
CSNK1A1P48729 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
CSNK1A1P48729 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.12□□□□□ -1.75
CSNK1A1P48729 AC015912.2-201ENST00000571053 181 ntBASIC4.12□□□□□ -1.75
CSNK1A1P48729 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.12□□□□□ -1.75
CSNK1A1P48729 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
CSNK1A1P48729 AC005520.3-201ENST00000602874 370 ntBASIC4.12□□□□□ -1.75
CSNK1A1P48729 IMMP1LP1-201ENST00000605170 488 ntBASIC4.12□□□□□ -1.75
CSNK1A1P48729 AC090948.2-201ENST00000607363 564 ntBASIC4.12□□□□□ -1.75
CSNK1A1P48729 FAM25E-202ENST00000608562 189 ntBASIC4.12□□□□□ -1.75
CSNK1A1P48729 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.12□□□□□ -1.75
CSNK1A1P48729 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.12□□□□□ -1.75
CSNK1A1P48729 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.12□□□□□ -1.75
CSNK1A1P48729 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.12□□□□□ -1.75
CSNK1A1P48729 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CSNK1A1P48729 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.12□□□□□ -1.75
CSNK1A1P48729 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.12□□□□□ -1.75
CSNK1A1P48729 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.11□□□□□ -1.75
CSNK1A1P48729 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.11□□□□□ -1.75
CSNK1A1P48729 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CSNK1A1P48729 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.11□□□□□ -1.75
CSNK1A1P48729 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CSNK1A1P48729 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CSNK1A1P48729 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CSNK1A1P48729 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.11□□□□□ -1.75
CSNK1A1P48729 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CSNK1A1P48729 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CSNK1A1P48729 OR10J6P-201ENST00000289731 930 ntBASIC4.11□□□□□ -1.75
CSNK1A1P48729 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CSNK1A1P48729 OR56B2P-201ENST00000317102 954 ntBASIC4.11□□□□□ -1.75
CSNK1A1P48729 IL6STP1-201ENST00000346911 1020 ntBASIC4.11□□□□□ -1.75
CSNK1A1P48729 RN7SKP103-201ENST00000363848 320 ntBASIC4.11□□□□□ -1.75
CSNK1A1P48729 RNA5SP87-201ENST00000384155 118 ntBASIC4.11□□□□□ -1.75
CSNK1A1P48729 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CSNK1A1P48729 OR51B3P-201ENST00000412287 913 ntBASIC4.11□□□□□ -1.75
CSNK1A1P48729 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.11□□□□□ -1.75
CSNK1A1P48729 RPL6P29-201ENST00000414863 865 ntBASIC4.11□□□□□ -1.75
CSNK1A1P48729 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.11□□□□□ -1.75
CSNK1A1P48729 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.11□□□□□ -1.75
CSNK1A1P48729 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.11□□□□□ -1.75
CSNK1A1P48729 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.11□□□□□ -1.75
CSNK1A1P48729 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.11□□□□□ -1.75
CSNK1A1P48729 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.11□□□□□ -1.75
CSNK1A1P48729 AC073587.1-201ENST00000447093 876 ntBASIC4.11□□□□□ -1.75
CSNK1A1P48729 RPL5P30-201ENST00000465511 891 ntBASIC4.11□□□□□ -1.75
CSNK1A1P48729 AC006967.1-201ENST00000467608 589 ntBASIC4.11□□□□□ -1.75
CSNK1A1P48729 RPL23AP37-201ENST00000479658 549 ntBASIC4.11□□□□□ -1.75
CSNK1A1P48729 RPS4XP18-201ENST00000495480 763 ntBASIC4.11□□□□□ -1.75
CSNK1A1P48729 AC091917.2-201ENST00000505002 744 ntBASIC4.11□□□□□ -1.75
CSNK1A1P48729 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.11□□□□□ -1.75
CSNK1A1P48729 OR7H2P-201ENST00000513483 306 ntBASIC4.11□□□□□ -1.75
CSNK1A1P48729 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.11□□□□□ -1.75
CSNK1A1P48729 IGHV3-63-201ENST00000518422 341 ntBASIC4.11□□□□□ -1.75
CSNK1A1P48729 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms