Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC097374.1-203ENST00000400783 485 ntBASIC5.22□□□□□ -1.57
NEDD4P46934 SNORA74C-2-201ENST00000411179 201 ntBASIC5.22□□□□□ -1.57
NEDD4P46934 RPS20P14-201ENST00000412545 360 ntBASIC5.22□□□□□ -1.57
NEDD4P46934 SEPT7P8-201ENST00000413308 775 ntBASIC5.22□□□□□ -1.57
NEDD4P46934 AC016712.1-201ENST00000431088 378 ntBASIC5.22□□□□□ -1.57
NEDD4P46934 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NEDD4P46934 CBX1P1-201ENST00000440184 427 ntBASIC5.22□□□□□ -1.57
NEDD4P46934 XKRYP6-201ENST00000440468 1116 ntBASIC5.22□□□□□ -1.57
NEDD4P46934 XKRYP3-201ENST00000442113 1116 ntBASIC5.22□□□□□ -1.57
NEDD4P46934 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.22□□□□□ -1.57
NEDD4P46934 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.22□□□□□ -1.57
NEDD4P46934 AC090013.1-201ENST00000485147 480 ntBASIC5.22□□□□□ -1.57
NEDD4P46934 AC093890.1-201ENST00000502554 540 ntBASIC5.22□□□□□ -1.57
NEDD4P46934 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.22□□□□□ -1.57
NEDD4P46934 AC034205.1-201ENST00000520621 638 ntBASIC5.22□□□□□ -1.57
NEDD4P46934 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.22□□□□□ -1.57
NEDD4P46934 TRAV8-5-201ENST00000537369 341 ntBASIC5.22□□□□□ -1.57
NEDD4P46934 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NEDD4P46934 GSTP1P1-201ENST00000548078 319 ntBASIC5.22□□□□□ -1.57
NEDD4P46934 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
NEDD4P46934 HMGB2P1-201ENST00000591146 634 ntBASIC5.22□□□□□ -1.57
NEDD4P46934 VN1R81P-201ENST00000602085 372 ntBASIC5.22□□□□□ -1.57
NEDD4P46934 AL356218.2-201ENST00000605264 187 ntBASIC5.22□□□□□ -1.57
NEDD4P46934 AC026979.4-201ENST00000606555 645 ntBASIC5.22□□□□□ -1.57
NEDD4P46934 Z98200.1-201ENST00000607298 470 ntBASIC5.22□□□□□ -1.57
NEDD4P46934 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
NEDD4P46934 AC007546.2-201ENST00000623996 360 ntBASIC5.22□□□□□ -1.57
NEDD4P46934 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.57
NEDD4P46934 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.57
NEDD4P46934 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NEDD4P46934 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NEDD4P46934 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
NEDD4P46934 AC090017.1-201ENST00000548612 1779 ntBASIC5.21□□□□□ -1.58
NEDD4P46934 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NEDD4P46934 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NEDD4P46934 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.21□□□□□ -1.58
NEDD4P46934 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.21□□□□□ -1.58
NEDD4P46934 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
NEDD4P46934 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
NEDD4P46934 CCT8P1-201ENST00000413611 1657 ntBASIC5.21□□□□□ -1.58
NEDD4P46934 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NEDD4P46934 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NEDD4P46934 OR5P1P-201ENST00000299512 925 ntBASIC5.21□□□□□ -1.58
NEDD4P46934 MIR331-201ENST00000362302 94 ntBASIC5.21□□□□□ -1.58
NEDD4P46934 MIR141-201ENST00000384975 95 ntBASIC5.21□□□□□ -1.58
NEDD4P46934 RNA5SP372-201ENST00000390836 115 ntBASIC5.21□□□□□ -1.58
NEDD4P46934 RNU4-25P-201ENST00000410569 230 ntBASIC5.21□□□□□ -1.58
NEDD4P46934 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NEDD4P46934 AL592293.2-201ENST00000422292 996 ntBASIC5.21□□□□□ -1.58
NEDD4P46934 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.21□□□□□ -1.58
NEDD4P46934 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.21□□□□□ -1.58
NEDD4P46934 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.21□□□□□ -1.58
NEDD4P46934 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.21□□□□□ -1.58
NEDD4P46934 RPL23AP52-201ENST00000439311 478 ntBASIC5.21□□□□□ -1.58
NEDD4P46934 EIF2S2P2-201ENST00000447161 982 ntBASIC5.21□□□□□ -1.58
NEDD4P46934 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NEDD4P46934 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.21□□□□□ -1.58
NEDD4P46934 AC011276.1-201ENST00000469688 323 ntBASIC5.21□□□□□ -1.58
NEDD4P46934 SEPT7P6-201ENST00000469999 1143 ntBASIC5.21□□□□□ -1.58
NEDD4P46934 NPM1P29-201ENST00000483112 803 ntBASIC5.21□□□□□ -1.58
NEDD4P46934 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.21□□□□□ -1.58
NEDD4P46934 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.21□□□□□ -1.58
NEDD4P46934 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.21□□□□□ -1.58
NEDD4P46934 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.21□□□□□ -1.58
NEDD4P46934 RNA5SP497-201ENST00000516081 97 ntBASIC5.21□□□□□ -1.58
NEDD4P46934 AC010476.1-201ENST00000519111 851 ntBASIC5.21□□□□□ -1.58
NEDD4P46934 KCTD9P6-201ENST00000522306 950 ntBASIC5.21□□□□□ -1.58
NEDD4P46934 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.21□□□□□ -1.58
NEDD4P46934 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC5.21□□□□□ -1.58
NEDD4P46934 AC010547.7-201ENST00000570323 333 ntBASIC5.21□□□□□ -1.58
NEDD4P46934 AP005262.1-201ENST00000582646 997 ntBASIC5.21□□□□□ -1.58
NEDD4P46934 SLC25A36P1-201ENST00000590111 465 ntBASIC5.21□□□□□ -1.58
NEDD4P46934 AL354984.3-201ENST00000604803 325 ntBASIC5.21□□□□□ -1.58
NEDD4P46934 MIR378J-201ENST00000611988 109 ntBASIC5.21□□□□□ -1.58
NEDD4P46934 AL035461.2-201ENST00000619201 524 ntBASIC5.21□□□□□ -1.58
NEDD4P46934 AC007546.1-201ENST00000619452 559 ntBASIC5.21□□□□□ -1.58
NEDD4P46934 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.21□□□□□ -1.58
NEDD4P46934 DDX18P4-201ENST00000511690 1966 ntBASIC5.21□□□□□ -1.58
NEDD4P46934 MTCO1P15-201ENST00000529569 1526 ntBASIC5.21□□□□□ -1.58
NEDD4P46934 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
NEDD4P46934 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NEDD4P46934 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.2□□□□□ -1.58
NEDD4P46934 AC083843.3-201ENST00000623679 2186 ntBASIC5.2□□□□□ -1.58
NEDD4P46934 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
NEDD4P46934 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
NEDD4P46934 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NEDD4P46934 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
NEDD4P46934 AP000542.2-201ENST00000623199 6179 ntBASIC5.2□□□□□ -1.58
NEDD4P46934 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.2□□□□□ -1.58
NEDD4P46934 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NEDD4P46934 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
NEDD4P46934 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NEDD4P46934 RNA5SP307-201ENST00000362863 116 ntBASIC5.2□□□□□ -1.58
NEDD4P46934 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
NEDD4P46934 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NEDD4P46934 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.2□□□□□ -1.58
NEDD4P46934 AC016397.1-201ENST00000412463 242 ntBASIC5.2□□□□□ -1.58
NEDD4P46934 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.2□□□□□ -1.58
NEDD4P46934 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.2□□□□□ -1.58
NEDD4P46934 AC062016.2-201ENST00000420950 676 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms