Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.48□□□□□ -1.69
SHMT2P34897 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.48□□□□□ -1.69
SHMT2P34897 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.48□□□□□ -1.69
SHMT2P34897 AC007016.1-201ENST00000512110 244 ntBASIC4.48□□□□□ -1.69
SHMT2P34897 RNA5SP228-201ENST00000516232 133 ntBASIC4.48□□□□□ -1.69
SHMT2P34897 RNA5SP360-201ENST00000516555 118 ntBASIC4.48□□□□□ -1.69
SHMT2P34897 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.48□□□□□ -1.69
SHMT2P34897 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.48□□□□□ -1.69
SHMT2P34897 AP001804.2-201ENST00000533932 910 ntBASIC4.48□□□□□ -1.69
SHMT2P34897 OR5AN2P-201ENST00000534535 896 ntBASIC4.48□□□□□ -1.69
SHMT2P34897 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.48□□□□□ -1.69
SHMT2P34897 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.48□□□□□ -1.69
SHMT2P34897 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.48□□□□□ -1.69
SHMT2P34897 EIF1AXP2-201ENST00000555940 413 ntBASIC4.48□□□□□ -1.69
SHMT2P34897 AC130352.1-201ENST00000602979 661 ntBASIC4.48□□□□□ -1.69
SHMT2P34897 AC119501.1-201ENST00000603646 475 ntBASIC4.48□□□□□ -1.69
SHMT2P34897 AL133406.3-201ENST00000606817 541 ntBASIC4.48□□□□□ -1.69
SHMT2P34897 AC019193.2-201ENST00000610012 634 ntBASIC4.48□□□□□ -1.69
SHMT2P34897 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.48□□□□□ -1.69
SHMT2P34897 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.48□□□□□ -1.69
SHMT2P34897 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.48□□□□□ -1.69
SHMT2P34897 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.48□□□□□ -1.69
SHMT2P34897 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SHMT2P34897 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHMT2P34897 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SHMT2P34897 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHMT2P34897 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHMT2P34897 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
SHMT2P34897 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SHMT2P34897 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHMT2P34897 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SHMT2P34897 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHMT2P34897 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SHMT2P34897 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.47□□□□□ -1.69
SHMT2P34897 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SHMT2P34897 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHMT2P34897 OR14L1P-202ENST00000641545 3009 ntBASIC4.47□□□□□ -1.69
SHMT2P34897 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHMT2P34897 MFSD8-242ENST00000641690 4199 ntBASIC4.47□□□□□ -1.69
SHMT2P34897 EOGT-210ENST00000615922 1931 ntBASIC4.47□□□□□ -1.69
SHMT2P34897 RNA5SP505-201ENST00000364748 108 ntBASIC4.47□□□□□ -1.69
SHMT2P34897 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SHMT2P34897 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SHMT2P34897 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.47□□□□□ -1.69
SHMT2P34897 AC240504.1-201ENST00000395709 845 ntBASIC4.47□□□□□ -1.69
SHMT2P34897 OR1F12-201ENST00000402365 945 ntBASIC4.47□□□□□ -1.69
SHMT2P34897 AL139039.2-201ENST00000407436 479 ntBASIC4.47□□□□□ -1.69
SHMT2P34897 RPL21P108-201ENST00000413857 481 ntBASIC4.47□□□□□ -1.69
SHMT2P34897 RPL26P29-201ENST00000415623 438 ntBASIC4.47□□□□□ -1.69
SHMT2P34897 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.47□□□□□ -1.69
SHMT2P34897 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.47□□□□□ -1.69
SHMT2P34897 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.47□□□□□ -1.69
SHMT2P34897 NDUFA12P1-201ENST00000455914 406 ntBASIC4.47□□□□□ -1.69
SHMT2P34897 MTND6P32-201ENST00000457611 483 ntBASIC4.47□□□□□ -1.69
SHMT2P34897 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.47□□□□□ -1.69
SHMT2P34897 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.47□□□□□ -1.69
SHMT2P34897 RN7SL738P-201ENST00000470264 297 ntBASIC4.47□□□□□ -1.69
SHMT2P34897 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.47□□□□□ -1.69
SHMT2P34897 STMN1P2-201ENST00000508435 439 ntBASIC4.47□□□□□ -1.69
SHMT2P34897 RN7SKP34-201ENST00000516142 244 ntBASIC4.47□□□□□ -1.69
SHMT2P34897 AF186190.1-201ENST00000517470 480 ntBASIC4.47□□□□□ -1.69
SHMT2P34897 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.47□□□□□ -1.69
SHMT2P34897 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.47□□□□□ -1.69
SHMT2P34897 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.47□□□□□ -1.69
SHMT2P34897 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.47□□□□□ -1.69
SHMT2P34897 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SHMT2P34897 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.47□□□□□ -1.69
SHMT2P34897 AC069061.3-201ENST00000582254 823 ntBASIC4.47□□□□□ -1.69
SHMT2P34897 FAM60CP-201ENST00000591086 664 ntBASIC4.47□□□□□ -1.69
SHMT2P34897 AC233280.2-201ENST00000603917 1070 ntBASIC4.47□□□□□ -1.69
SHMT2P34897 AC131238.1-201ENST00000617135 328 ntBASIC4.47□□□□□ -1.69
SHMT2P34897 AL359757.1-201ENST00000623176 255 ntBASIC4.47□□□□□ -1.69
SHMT2P34897 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.47□□□□□ -1.69
SHMT2P34897 AC007342.9-201ENST00000623877 1385 ntBASIC4.47□□□□□ -1.69
SHMT2P34897 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SHMT2P34897 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHMT2P34897 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
SHMT2P34897 KARSP3-201ENST00000571212 1504 ntBASIC4.46□□□□□ -1.69
SHMT2P34897 AC120338.1-201ENST00000625074 1541 ntBASIC4.46□□□□□ -1.69
SHMT2P34897 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SHMT2P34897 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.46□□□□□ -1.69
SHMT2P34897 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.46□□□□□ -1.69
SHMT2P34897 AC139713.2-215ENST00000641428 5037 ntBASIC4.46□□□□□ -1.69
SHMT2P34897 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SHMT2P34897 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.46□□□□□ -1.7
SHMT2P34897 MFSD8-216ENST00000641147 4009 ntBASIC4.46□□□□□ -1.7
SHMT2P34897 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SHMT2P34897 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SHMT2P34897 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
SHMT2P34897 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.46□□□□□ -1.7
SHMT2P34897 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.46□□□□□ -1.7
SHMT2P34897 AC069213.2-201ENST00000420238 366 ntBASIC4.46□□□□□ -1.7
SHMT2P34897 UQCRBP1-201ENST00000421129 336 ntBASIC4.46□□□□□ -1.7
SHMT2P34897 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.46□□□□□ -1.7
SHMT2P34897 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.46□□□□□ -1.7
SHMT2P34897 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.46□□□□□ -1.7
SHMT2P34897 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.46□□□□□ -1.7
SHMT2P34897 ARL2BPP10-201ENST00000446487 531 ntBASIC4.46□□□□□ -1.7
SHMT2P34897 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.46□□□□□ -1.7
SHMT2P34897 AC073587.1-201ENST00000447093 876 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 475.7 ms