Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AP001922.4-201ENST00000526967 290 ntBASIC4.89□□□□□ -1.63
HLA-DPA1P20036 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DPA1P20036 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DPA1P20036 AL049839.1-201ENST00000556151 657 ntBASIC4.89□□□□□ -1.63
HLA-DPA1P20036 AC084757.1-201ENST00000559987 490 ntBASIC4.89□□□□□ -1.63
HLA-DPA1P20036 HMGB3P26-201ENST00000560051 582 ntBASIC4.89□□□□□ -1.63
HLA-DPA1P20036 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DPA1P20036 OR1F2P-201ENST00000570470 933 ntBASIC4.89□□□□□ -1.63
HLA-DPA1P20036 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.89□□□□□ -1.63
HLA-DPA1P20036 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DPA1P20036 SUMO2P14-201ENST00000604488 293 ntBASIC4.89□□□□□ -1.63
HLA-DPA1P20036 AL121932.1-201ENST00000605542 214 ntBASIC4.89□□□□□ -1.63
HLA-DPA1P20036 AC025175.1-201ENST00000606482 759 ntBASIC4.89□□□□□ -1.63
HLA-DPA1P20036 AC017076.1-201ENST00000607613 578 ntBASIC4.89□□□□□ -1.63
HLA-DPA1P20036 AC100847.1-201ENST00000611316 481 ntBASIC4.89□□□□□ -1.63
HLA-DPA1P20036 AC021242.1-201ENST00000507315 2035 ntBASIC4.89□□□□□ -1.63
HLA-DPA1P20036 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DPA1P20036 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.89□□□□□ -1.63
HLA-DPA1P20036 AL672167.1-204ENST00000641875 3017 ntBASIC4.89□□□□□ -1.63
HLA-DPA1P20036 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 DHX9P1-201ENST00000436565 3076 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 OR5T3-201ENST00000303059 1023 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 IGKV7-3-201ENST00000357453 298 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 MIR550A3-201ENST00000390735 95 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 AC114755.2-201ENST00000413520 361 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 VN1R37P-201ENST00000419096 748 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 RGS17P1-201ENST00000423358 553 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 EIF4HP2-201ENST00000424380 563 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 CKS1BP6-201ENST00000424932 240 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 OR2AH1P-201ENST00000425717 928 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 MRPL48P1-201ENST00000445390 636 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 SUMO2P1-206ENST00000445436 284 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 HIGD1AP8-201ENST00000453927 274 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 AC090686.1-201ENST00000481577 749 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 AC020890.1-201ENST00000491837 504 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 RNA5SP303-201ENST00000516192 130 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 AF186190.1-201ENST00000517470 480 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 OR5AZ1P-201ENST00000527448 943 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 GCSHP4-201ENST00000538792 439 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 AC008033.2-201ENST00000542626 177 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 EDDM3DP-201ENST00000554692 434 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 MIR4436B2-201ENST00000581415 91 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 MIR4436B1-201ENST00000583272 91 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 AC015802.5-201ENST00000607478 399 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 AL022401.1-201ENST00000619498 108 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 AL022393.1-201ENST00000625142 1677 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 AC000374.1-201ENST00000434698 1745 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 CASC19-206ENST00000641028 1430 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 Z95327.2-201ENST00000414579 1873 ntBASIC4.88□□□□□ -1.63
HLA-DPA1P20036 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-DPA1P20036 AL049555.1-201ENST00000562834 1933 ntBASIC4.87□□□□□ -1.63
HLA-DPA1P20036 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DPA1P20036 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DPA1P20036 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DPA1P20036 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DPA1P20036 AL359922.3-201ENST00000624779 1670 ntBASIC4.87□□□□□ -1.63
HLA-DPA1P20036 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DPA1P20036 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DPA1P20036 AC008549.2-201ENST00000333482 706 ntBASIC4.87□□□□□ -1.63
HLA-DPA1P20036 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DPA1P20036 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms