Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
HMGA1P17096 VN1R85P-201ENST00000601587 426 ntBASIC4.49□□□□□ -1.69
HMGA1P17096 AC005034.4-201ENST00000603612 899 ntBASIC4.49□□□□□ -1.69
HMGA1P17096 AC024941.1-201ENST00000612250 334 ntBASIC4.49□□□□□ -1.69
HMGA1P17096 AC022106.2-201ENST00000620114 757 ntBASIC4.49□□□□□ -1.69
HMGA1P17096 AC015871.5-202ENST00000623252 701 ntBASIC4.49□□□□□ -1.69
HMGA1P17096 AC008013.2-202ENST00000637965 364 ntBASIC4.49□□□□□ -1.69
HMGA1P17096 VPS35P1-201ENST00000563400 1518 ntBASIC4.49□□□□□ -1.69
HMGA1P17096 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HMGA1P17096 AC083843.2-201ENST00000568248 6253 ntBASIC4.49□□□□□ -1.69
HMGA1P17096 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
HMGA1P17096 NCOA4P2-201ENST00000340589 1813 ntBASIC4.49□□□□□ -1.69
HMGA1P17096 AC022893.2-201ENST00000564832 3296 ntBASIC4.48□□□□□ -1.69
HMGA1P17096 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMGA1P17096 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMGA1P17096 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMGA1P17096 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
HMGA1P17096 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMGA1P17096 AP001002.1-201ENST00000625148 1513 ntBASIC4.48□□□□□ -1.69
HMGA1P17096 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.48□□□□□ -1.69
HMGA1P17096 RNU1-20P-201ENST00000363314 162 ntBASIC4.48□□□□□ -1.69
HMGA1P17096 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HMGA1P17096 RN7SKP33-201ENST00000410942 340 ntBASIC4.48□□□□□ -1.69
HMGA1P17096 AL356968.2-201ENST00000412769 1257 ntBASIC4.48□□□□□ -1.69
HMGA1P17096 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.48□□□□□ -1.69
HMGA1P17096 AL356095.1-201ENST00000417217 199 ntBASIC4.48□□□□□ -1.69
HMGA1P17096 RCC2P2-201ENST00000422174 918 ntBASIC4.48□□□□□ -1.69
HMGA1P17096 COX6B1P7-201ENST00000430845 235 ntBASIC4.48□□□□□ -1.69
HMGA1P17096 RPL34P6-201ENST00000432390 345 ntBASIC4.48□□□□□ -1.69
HMGA1P17096 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.48□□□□□ -1.69
HMGA1P17096 EEF1A1P1-201ENST00000447052 739 ntBASIC4.48□□□□□ -1.69
HMGA1P17096 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMGA1P17096 AC090013.1-201ENST00000485147 480 ntBASIC4.48□□□□□ -1.69
HMGA1P17096 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.48□□□□□ -1.69
HMGA1P17096 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.48□□□□□ -1.69
HMGA1P17096 AC026402.1-201ENST00000513642 170 ntBASIC4.48□□□□□ -1.69
HMGA1P17096 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.48□□□□□ -1.69
HMGA1P17096 MIR2116-201ENST00000517221 80 ntBASIC4.48□□□□□ -1.69
HMGA1P17096 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.48□□□□□ -1.69
HMGA1P17096 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.48□□□□□ -1.69
HMGA1P17096 AC010547.7-201ENST00000570323 333 ntBASIC4.48□□□□□ -1.69
HMGA1P17096 AC027455.1-201ENST00000574104 594 ntBASIC4.48□□□□□ -1.69
HMGA1P17096 MIR4472-2-201ENST00000582069 67 ntBASIC4.48□□□□□ -1.69
HMGA1P17096 AL109618.2-201ENST00000605527 211 ntBASIC4.48□□□□□ -1.69
HMGA1P17096 AC090948.2-201ENST00000607363 564 ntBASIC4.48□□□□□ -1.69
HMGA1P17096 MIR6867-201ENST00000610636 67 ntBASIC4.48□□□□□ -1.69
HMGA1P17096 SNX18P1Y-201ENST00000616231 511 ntBASIC4.48□□□□□ -1.69
HMGA1P17096 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
HMGA1P17096 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.48□□□□□ -1.69
HMGA1P17096 AC068870.3-201ENST00000625077 2536 ntBASIC4.48□□□□□ -1.69
HMGA1P17096 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
HMGA1P17096 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HMGA1P17096 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HMGA1P17096 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HMGA1P17096 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HMGA1P17096 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HMGA1P17096 RNU1-44P-201ENST00000384453 163 ntBASIC4.47□□□□□ -1.69
HMGA1P17096 SNORA37-201ENST00000384504 129 ntBASIC4.47□□□□□ -1.69
HMGA1P17096 AL078604.1-201ENST00000404609 466 ntBASIC4.47□□□□□ -1.69
HMGA1P17096 RN7SKP182-201ENST00000410772 298 ntBASIC4.47□□□□□ -1.69
HMGA1P17096 EIF4A1P3-201ENST00000411521 244 ntBASIC4.47□□□□□ -1.69
HMGA1P17096 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HMGA1P17096 PPIAP13-201ENST00000434706 478 ntBASIC4.47□□□□□ -1.69
HMGA1P17096 HSFY6P-201ENST00000445573 403 ntBASIC4.47□□□□□ -1.69
HMGA1P17096 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.47□□□□□ -1.69
HMGA1P17096 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
HMGA1P17096 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.47□□□□□ -1.69
HMGA1P17096 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.47□□□□□ -1.69
HMGA1P17096 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.47□□□□□ -1.69
HMGA1P17096 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.47□□□□□ -1.69
HMGA1P17096 AC005086.4-201ENST00000623065 213 ntBASIC4.47□□□□□ -1.69
HMGA1P17096 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.47□□□□□ -1.69
HMGA1P17096 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HMGA1P17096 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
HMGA1P17096 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HMGA1P17096 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.47□□□□□ -1.69
HMGA1P17096 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.47□□□□□ -1.69
HMGA1P17096 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
HMGA1P17096 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC4.46□□□□□ -1.69
HMGA1P17096 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
HMGA1P17096 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HMGA1P17096 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
HMGA1P17096 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HMGA1P17096 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.46□□□□□ -1.7
HMGA1P17096 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.46□□□□□ -1.7
HMGA1P17096 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMGA1P17096 TCP1P3-201ENST00000414406 1498 ntBASIC4.46□□□□□ -1.7
HMGA1P17096 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HMGA1P17096 SPRR2C-201ENST00000290702 219 ntBASIC4.46□□□□□ -1.7
HMGA1P17096 MIR372-201ENST00000362225 67 ntBASIC4.46□□□□□ -1.7
HMGA1P17096 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMGA1P17096 SNORD96B-201ENST00000386148 79 ntBASIC4.46□□□□□ -1.7
HMGA1P17096 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.46□□□□□ -1.7
HMGA1P17096 MIR1911-201ENST00000410783 80 ntBASIC4.46□□□□□ -1.7
HMGA1P17096 RPL17P36-201ENST00000420302 549 ntBASIC4.46□□□□□ -1.7
HMGA1P17096 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.46□□□□□ -1.7
HMGA1P17096 EIF1P3-201ENST00000423841 334 ntBASIC4.46□□□□□ -1.7
HMGA1P17096 MTCYBP21-201ENST00000443300 1113 ntBASIC4.46□□□□□ -1.7
HMGA1P17096 RPL23AP65-201ENST00000475608 468 ntBASIC4.46□□□□□ -1.7
HMGA1P17096 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms