Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
CSB-PGBD3P0DP91 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
CSB-PGBD3P0DP91 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 MIR320B1-201ENST00000390209 79 ntBASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 MTCO3P31-201ENST00000405526 789 ntBASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 MIR1277-201ENST00000408536 78 ntBASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 TRIM60P3Y-201ENST00000432201 673 ntBASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 HMGB3P24-201ENST00000433260 622 ntBASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 HMGB1P31-201ENST00000437242 427 ntBASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 AL606490.1-201ENST00000452266 765 ntBASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 AC093166.4-201ENST00000457867 318 ntBASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 RPS23P6-201ENST00000466136 431 ntBASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 RN7SL184P-201ENST00000488308 297 ntBASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 AC109445.1-201ENST00000512356 383 ntBASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 HNRNPKP5-201ENST00000515300 253 ntBASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 AC044860.2-201ENST00000561005 179 ntBASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 MTCO3P13-201ENST00000577757 781 ntBASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 AL607023.1-201ENST00000620045 248 ntBASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 AC145207.9-201ENST00000623802 325 ntBASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 AC112204.3-201ENST00000623822 332 ntBASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 AC011477.1-204ENST00000623416 1325 ntBASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 C4BPAP1-201ENST00000415474 1893 ntBASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 CTAGE11P-201ENST00000451540 2353 ntBASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.96□□□□□ -1.14
CSB-PGBD3P0DP91 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 SPTLC1P2-201ENST00000407089 121 ntBASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 SNORA11C-201ENST00000408532 129 ntBASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 RNA5SP80-201ENST00000410475 111 ntBASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 DPPA2P3-201ENST00000411853 655 ntBASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 BMS1P17-202ENST00000416720 316 ntBASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 DNAJA1P2-201ENST00000421360 1197 ntBASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 AL662791.1-201ENST00000441992 928 ntBASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 RBMY2TP-201ENST00000451162 947 ntBASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 RPL7P1-201ENST00000468161 747 ntBASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 RPL7P9-201ENST00000468715 747 ntBASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 ARL4AP2-201ENST00000507378 601 ntBASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 AC079395.1-201ENST00000510981 262 ntBASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 BX510359.5-201ENST00000515651 304 ntBASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 AP006245.2-201ENST00000522004 300 ntBASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 IGLV3-30-201ENST00000524362 298 ntBASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 OR5AZ1P-201ENST00000527448 943 ntBASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 POLR2KP1-201ENST00000553226 168 ntBASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 AL049872.1-201ENST00000556323 322 ntBASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 MIR3189-201ENST00000578735 73 ntBASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 AC044792.1-201ENST00000593294 196 ntBASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 AC011453.2-201ENST00000603737 729 ntBASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 AC009220.3-201ENST00000604318 586 ntBASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 HDAC1P2-201ENST00000453661 1398 ntBASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 AC022819.1-201ENST00000563495 3910 ntBASIC7.95□□□□□ -1.14
CSB-PGBD3P0DP91 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.94□□□□□ -1.14
CSB-PGBD3P0DP91 ELF2P3-201ENST00000445099 1506 ntBASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms