Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 VN1R32P-201ENST00000452234 905 ntBASIC3.42□□□□□ -1.86
CXCL1P09341 RN7SL717P-201ENST00000478343 297 ntBASIC3.42□□□□□ -1.86
CXCL1P09341 IGLV2-34-201ENST00000490007 283 ntBASIC3.42□□□□□ -1.86
CXCL1P09341 AC106872.2-201ENST00000494303 480 ntBASIC3.42□□□□□ -1.86
CXCL1P09341 AC098799.3-201ENST00000506095 438 ntBASIC3.42□□□□□ -1.86
CXCL1P09341 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.42□□□□□ -1.86
CXCL1P09341 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC3.42□□□□□ -1.86
CXCL1P09341 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.42□□□□□ -1.86
CXCL1P09341 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.42□□□□□ -1.86
CXCL1P09341 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC3.42□□□□□ -1.86
CXCL1P09341 AP001804.2-201ENST00000533932 910 ntBASIC3.42□□□□□ -1.86
CXCL1P09341 RFPL1S-203ENST00000539579 330 ntBASIC3.42□□□□□ -1.86
CXCL1P09341 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC3.42□□□□□ -1.86
CXCL1P09341 OR11J2P-201ENST00000555298 907 ntBASIC3.42□□□□□ -1.86
CXCL1P09341 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC3.42□□□□□ -1.86
CXCL1P09341 AC079171.1-201ENST00000568788 914 ntBASIC3.42□□□□□ -1.86
CXCL1P09341 AC090312.1-201ENST00000580637 348 ntBASIC3.42□□□□□ -1.86
CXCL1P09341 MIR4691-201ENST00000583764 85 ntBASIC3.42□□□□□ -1.86
CXCL1P09341 AL512329.2-201ENST00000607350 548 ntBASIC3.42□□□□□ -1.86
CXCL1P09341 AP002505.2-201ENST00000623585 696 ntBASIC3.42□□□□□ -1.86
CXCL1P09341 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.42□□□□□ -1.86
CXCL1P09341 SNORA17.5-201ENST00000630429 132 ntBASIC3.42□□□□□ -1.86
CXCL1P09341 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.42□□□□□ -1.86
CXCL1P09341 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
CXCL1P09341 AL445437.1-201ENST00000623157 3087 ntBASIC3.42□□□□□ -1.86
CXCL1P09341 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CXCL1P09341 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.41□□□□□ -1.86
CXCL1P09341 NOL8P1-201ENST00000508336 3529 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CXCL1P09341 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
CXCL1P09341 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
CXCL1P09341 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CXCL1P09341 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.41□□□□□ -1.86
CXCL1P09341 AC010329.2-201ENST00000595195 2737 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CXCL1P09341 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CXCL1P09341 RNA5SP307-201ENST00000362863 116 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.41□□□□□ -1.86
CXCL1P09341 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CXCL1P09341 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CXCL1P09341 CXADRP1-201ENST00000398098 1095 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 OR51B3P-201ENST00000412287 913 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 USP12PY-201ENST00000427677 1064 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC3.41□□□□□ -1.86
CXCL1P09341 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC3.41□□□□□ -1.86
CXCL1P09341 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC3.41□□□□□ -1.86
CXCL1P09341 YWHAQP9-201ENST00000445891 512 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 AC099063.2-201ENST00000446360 662 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 FAR2P1-206ENST00000449736 709 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC3.41□□□□□ -1.86
CXCL1P09341 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.41□□□□□ -1.86
CXCL1P09341 STRADBP1-201ENST00000478954 1281 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC3.41□□□□□ -1.86
CXCL1P09341 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC3.41□□□□□ -1.86
CXCL1P09341 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC3.41□□□□□ -1.86
CXCL1P09341 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC3.41□□□□□ -1.86
CXCL1P09341 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.41□□□□□ -1.86
CXCL1P09341 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.41□□□□□ -1.86
CXCL1P09341 BMPR1APS2-201ENST00000527904 1012 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.41□□□□□ -1.86
CXCL1P09341 AC133555.2-201ENST00000550213 292 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.41□□□□□ -1.86
CXCL1P09341 AL352979.3-201ENST00000553515 247 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC3.41□□□□□ -1.86
CXCL1P09341 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.41□□□□□ -1.86
CXCL1P09341 RPL23AP97-201ENST00000568955 471 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 AC020978.7-201ENST00000575953 1187 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 MIR744-201ENST00000578242 98 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC3.41□□□□□ -1.86
CXCL1P09341 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC3.41□□□□□ -1.86
CXCL1P09341 ADAD1P2-201ENST00000588476 646 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 AC073137.1-201ENST00000605636 634 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 AC004825.2-201ENST00000616634 455 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 CXADRP3-202ENST00000617265 1100 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 AL359742.1-201ENST00000622497 540 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 AC007546.2-201ENST00000623996 360 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.41□□□□□ -1.86
CXCL1P09341 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC3.41□□□□□ -1.86
CXCL1P09341 A2MP1-204ENST00000566278 4130 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.41□□□□□ -1.86
CXCL1P09341 AC135352.1-201ENST00000506173 1418 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 AC010928.1-201ENST00000592477 1447 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CXCL1P09341 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CXCL1P09341 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.41□□□□□ -1.86
CXCL1P09341 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CXCL1P09341 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.41□□□□□ -1.86
CXCL1P09341 NCLP2-201ENST00000416078 1462 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 AL391684.1-202ENST00000641293 1636 ntBASIC3.41□□□□□ -1.86
CXCL1P09341 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CXCL1P09341 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
CXCL1P09341 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
CXCL1P09341 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.4□□□□□ -1.86
CXCL1P09341 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CXCL1P09341 RNA5SP455-201ENST00000365190 119 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 SDHCP2-201ENST00000398565 501 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 Z98745.1-201ENST00000402553 494 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms