Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 SNORD65-201ENST00000391079 73 ntBASIC5.34□□□□□ -1.55
MMP3P08254 U3.22-201ENST00000391120 215 ntBASIC5.34□□□□□ -1.55
MMP3P08254 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
MMP3P08254 ELOCP19-201ENST00000411919 318 ntBASIC5.34□□□□□ -1.55
MMP3P08254 OR13Z1P-201ENST00000416141 834 ntBASIC5.34□□□□□ -1.55
MMP3P08254 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.34□□□□□ -1.55
MMP3P08254 MTCO2P17-201ENST00000424336 677 ntBASIC5.34□□□□□ -1.55
MMP3P08254 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.34□□□□□ -1.55
MMP3P08254 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.34□□□□□ -1.55
MMP3P08254 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.34□□□□□ -1.55
MMP3P08254 RN7SL517P-201ENST00000462240 305 ntBASIC5.34□□□□□ -1.55
MMP3P08254 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.34□□□□□ -1.55
MMP3P08254 Y_RNA.719-201ENST00000517156 106 ntBASIC5.34□□□□□ -1.55
MMP3P08254 AC020937.1-201ENST00000519677 1013 ntBASIC5.34□□□□□ -1.55
MMP3P08254 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.34□□□□□ -1.55
MMP3P08254 TOMM20P2-201ENST00000540082 421 ntBASIC5.34□□□□□ -1.55
MMP3P08254 AC105129.1-201ENST00000560250 297 ntBASIC5.34□□□□□ -1.55
MMP3P08254 AC040958.1-201ENST00000561102 201 ntBASIC5.34□□□□□ -1.55
MMP3P08254 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.34□□□□□ -1.55
MMP3P08254 AP005119.2-201ENST00000579735 1105 ntBASIC5.34□□□□□ -1.55
MMP3P08254 RN7SL339P-201ENST00000580597 296 ntBASIC5.34□□□□□ -1.55
MMP3P08254 RPL12P25-202ENST00000598100 674 ntBASIC5.34□□□□□ -1.55
MMP3P08254 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
MMP3P08254 AL359757.1-201ENST00000623176 255 ntBASIC5.34□□□□□ -1.55
MMP3P08254 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.34□□□□□ -1.55
MMP3P08254 AL592148.3-201ENST00000608771 2646 ntBASIC5.34□□□□□ -1.55
MMP3P08254 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.56
MMP3P08254 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
MMP3P08254 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
MMP3P08254 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
MMP3P08254 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
MMP3P08254 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
MMP3P08254 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.56
MMP3P08254 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
MMP3P08254 AC011447.7-201ENST00000624228 1590 ntBASIC5.33□□□□□ -1.56
MMP3P08254 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.33□□□□□ -1.56
MMP3P08254 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.33□□□□□ -1.56
MMP3P08254 TRIM51GP-201ENST00000534741 1350 ntBASIC5.33□□□□□ -1.56
MMP3P08254 CBX1P3-201ENST00000413296 527 ntBASIC5.33□□□□□ -1.56
MMP3P08254 AC004690.1-201ENST00000418216 328 ntBASIC5.33□□□□□ -1.56
MMP3P08254 RPEP3-201ENST00000425462 676 ntBASIC5.33□□□□□ -1.56
MMP3P08254 AL096829.2-201ENST00000446582 742 ntBASIC5.33□□□□□ -1.56
MMP3P08254 RPL23AP23-201ENST00000452590 471 ntBASIC5.33□□□□□ -1.56
MMP3P08254 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.33□□□□□ -1.56
MMP3P08254 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.33□□□□□ -1.56
MMP3P08254 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
MMP3P08254 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.33□□□□□ -1.56
MMP3P08254 RNU6-709P-201ENST00000517257 104 ntBASIC5.33□□□□□ -1.56
MMP3P08254 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.33□□□□□ -1.56
MMP3P08254 HAUS1P3-201ENST00000523909 662 ntBASIC5.33□□□□□ -1.56
MMP3P08254 AP001372.4-201ENST00000524889 472 ntBASIC5.33□□□□□ -1.56
MMP3P08254 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.33□□□□□ -1.56
MMP3P08254 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
MMP3P08254 PARP1P2-201ENST00000556806 195 ntBASIC5.33□□□□□ -1.56
MMP3P08254 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.33□□□□□ -1.56
MMP3P08254 AC090666.1-201ENST00000578241 445 ntBASIC5.33□□□□□ -1.56
MMP3P08254 AC010487.1-201ENST00000594408 1172 ntBASIC5.33□□□□□ -1.56
MMP3P08254 AC091057.3-201ENST00000602684 733 ntBASIC5.33□□□□□ -1.56
MMP3P08254 AC015849.2-201ENST00000605738 409 ntBASIC5.33□□□□□ -1.56
MMP3P08254 AP005229.2-201ENST00000609980 697 ntBASIC5.33□□□□□ -1.56
MMP3P08254 AP003476.1-201ENST00000623984 516 ntBASIC5.33□□□□□ -1.56
MMP3P08254 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.33□□□□□ -1.56
MMP3P08254 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
MMP3P08254 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.33□□□□□ -1.56
MMP3P08254 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
MMP3P08254 AC010266.2-201ENST00000564741 3255 ntBASIC5.33□□□□□ -1.56
MMP3P08254 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.33□□□□□ -1.56
MMP3P08254 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
MMP3P08254 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
MMP3P08254 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
MMP3P08254 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
MMP3P08254 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.32□□□□□ -1.56
MMP3P08254 AC009643.2-201ENST00000603543 1448 ntBASIC5.32□□□□□ -1.56
MMP3P08254 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
MMP3P08254 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
MMP3P08254 SAMM50P1-201ENST00000455403 1399 ntBASIC5.32□□□□□ -1.56
MMP3P08254 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
MMP3P08254 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
MMP3P08254 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
MMP3P08254 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
MMP3P08254 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
MMP3P08254 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.32□□□□□ -1.56
MMP3P08254 COX5BP7-201ENST00000414780 274 ntBASIC5.32□□□□□ -1.56
MMP3P08254 AL158050.1-201ENST00000416077 457 ntBASIC5.32□□□□□ -1.56
MMP3P08254 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.32□□□□□ -1.56
MMP3P08254 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.32□□□□□ -1.56
MMP3P08254 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
MMP3P08254 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.32□□□□□ -1.56
MMP3P08254 Z80107.1-201ENST00000436830 412 ntBASIC5.32□□□□□ -1.56
MMP3P08254 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.32□□□□□ -1.56
MMP3P08254 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.32□□□□□ -1.56
MMP3P08254 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.32□□□□□ -1.56
MMP3P08254 AC013356.1-201ENST00000489027 564 ntBASIC5.32□□□□□ -1.56
MMP3P08254 PPM1AP1-201ENST00000502740 1135 ntBASIC5.32□□□□□ -1.56
MMP3P08254 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
MMP3P08254 AC112518.2-201ENST00000508565 425 ntBASIC5.32□□□□□ -1.56
MMP3P08254 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC5.32□□□□□ -1.56
MMP3P08254 AC121161.1-201ENST00000510606 652 ntBASIC5.32□□□□□ -1.56
MMP3P08254 RNU5A-7P-201ENST00000515979 116 ntBASIC5.32□□□□□ -1.56
MMP3P08254 SNORA70.11-201ENST00000515987 138 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms