Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC006065.1-201ENST00000422539 802 ntBASIC4.74□□□□□ -1.65
APOEP02649 RPL21P43-201ENST00000425440 472 ntBASIC4.74□□□□□ -1.65
APOEP02649 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
APOEP02649 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.74□□□□□ -1.65
APOEP02649 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.74□□□□□ -1.65
APOEP02649 RN7SL817P-201ENST00000480777 288 ntBASIC4.74□□□□□ -1.65
APOEP02649 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.74□□□□□ -1.65
APOEP02649 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.74□□□□□ -1.65
APOEP02649 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.74□□□□□ -1.65
APOEP02649 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.74□□□□□ -1.65
APOEP02649 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.74□□□□□ -1.65
APOEP02649 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.74□□□□□ -1.65
APOEP02649 AL139041.1-201ENST00000605480 610 ntBASIC4.74□□□□□ -1.65
APOEP02649 AC100847.1-201ENST00000611316 481 ntBASIC4.74□□□□□ -1.65
APOEP02649 LINC01808-202ENST00000641680 1116 ntBASIC4.74□□□□□ -1.65
APOEP02649 MFSD8-216ENST00000641147 4009 ntBASIC4.74□□□□□ -1.65
APOEP02649 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.74□□□□□ -1.65
APOEP02649 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
APOEP02649 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
APOEP02649 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.74□□□□□ -1.65
APOEP02649 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.74□□□□□ -1.65
APOEP02649 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
APOEP02649 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.73□□□□□ -1.65
APOEP02649 AL132640.2-201ENST00000559968 1698 ntBASIC4.73□□□□□ -1.65
APOEP02649 OR56B2P-202ENST00000641377 2453 ntBASIC4.73□□□□□ -1.65
APOEP02649 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
APOEP02649 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.73□□□□□ -1.65
APOEP02649 AC107027.3-201ENST00000565095 3473 ntBASIC4.73□□□□□ -1.65
APOEP02649 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.73□□□□□ -1.65
APOEP02649 AL450326.2-201ENST00000421913 1962 ntBASIC4.73□□□□□ -1.65
APOEP02649 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
APOEP02649 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
APOEP02649 IL6STP1-201ENST00000346911 1020 ntBASIC4.73□□□□□ -1.65
APOEP02649 RNU1-20P-201ENST00000363314 162 ntBASIC4.73□□□□□ -1.65
APOEP02649 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.73□□□□□ -1.65
APOEP02649 MIR129-1-201ENST00000384972 72 ntBASIC4.73□□□□□ -1.65
APOEP02649 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
APOEP02649 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
APOEP02649 AC004448.2-201ENST00000422360 586 ntBASIC4.73□□□□□ -1.65
APOEP02649 CENPIP1-201ENST00000425713 902 ntBASIC4.73□□□□□ -1.65
APOEP02649 IPMKP1-201ENST00000425988 855 ntBASIC4.73□□□□□ -1.65
APOEP02649 DNAJC19P7-201ENST00000428811 344 ntBASIC4.73□□□□□ -1.65
APOEP02649 CNOT7P1-201ENST00000429006 852 ntBASIC4.73□□□□□ -1.65
APOEP02649 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
APOEP02649 NDUFA5P1-201ENST00000433858 341 ntBASIC4.73□□□□□ -1.65
APOEP02649 RPL23AP93-201ENST00000440847 484 ntBASIC4.73□□□□□ -1.65
APOEP02649 NPM1P39-201ENST00000449818 867 ntBASIC4.73□□□□□ -1.65
APOEP02649 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.73□□□□□ -1.65
APOEP02649 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.73□□□□□ -1.65
APOEP02649 MTND2P28-201ENST00000457540 1044 ntBASIC4.73□□□□□ -1.65
APOEP02649 AC104849.1-201ENST00000462623 405 ntBASIC4.73□□□□□ -1.65
APOEP02649 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.73□□□□□ -1.65
APOEP02649 ATP5G1P3-201ENST00000463301 410 ntBASIC4.73□□□□□ -1.65
APOEP02649 AC006463.2-201ENST00000473326 348 ntBASIC4.73□□□□□ -1.65
APOEP02649 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.73□□□□□ -1.65
APOEP02649 UBA52P3-201ENST00000491303 382 ntBASIC4.73□□□□□ -1.65
APOEP02649 AC021146.3-201ENST00000511911 260 ntBASIC4.73□□□□□ -1.65
APOEP02649 MTCYBP19-201ENST00000517463 1124 ntBASIC4.73□□□□□ -1.65
APOEP02649 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.73□□□□□ -1.65
APOEP02649 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
APOEP02649 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.73□□□□□ -1.65
APOEP02649 SNX18P1Y-201ENST00000616231 511 ntBASIC4.73□□□□□ -1.65
APOEP02649 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
APOEP02649 AC002044.3-201ENST00000623314 541 ntBASIC4.73□□□□□ -1.65
APOEP02649 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.73□□□□□ -1.65
APOEP02649 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.73□□□□□ -1.65
APOEP02649 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
APOEP02649 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.73□□□□□ -1.65
APOEP02649 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
APOEP02649 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
APOEP02649 KPNA2P2-201ENST00000419546 1489 ntBASIC4.73□□□□□ -1.65
APOEP02649 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
APOEP02649 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.73□□□□□ -1.65
APOEP02649 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
APOEP02649 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
APOEP02649 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
APOEP02649 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.72□□□□□ -1.65
APOEP02649 FCF1P5-201ENST00000406490 482 ntBASIC4.72□□□□□ -1.65
APOEP02649 AC009237.10-201ENST00000414112 510 ntBASIC4.72□□□□□ -1.65
APOEP02649 OR2X1P-201ENST00000421144 687 ntBASIC4.72□□□□□ -1.65
APOEP02649 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.72□□□□□ -1.65
APOEP02649 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.72□□□□□ -1.65
APOEP02649 TPT1P13-201ENST00000449760 499 ntBASIC4.72□□□□□ -1.65
APOEP02649 AC005008.1-201ENST00000456151 612 ntBASIC4.72□□□□□ -1.65
APOEP02649 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.72□□□□□ -1.65
APOEP02649 snoU13.1-201ENST00000459157 104 ntBASIC4.72□□□□□ -1.65
APOEP02649 AC096741.1-201ENST00000472250 846 ntBASIC4.72□□□□□ -1.65
APOEP02649 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.72□□□□□ -1.65
APOEP02649 AK4P6-201ENST00000505168 528 ntBASIC4.72□□□□□ -1.65
APOEP02649 RNA5SP446-201ENST00000515955 82 ntBASIC4.72□□□□□ -1.65
APOEP02649 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.72□□□□□ -1.65
APOEP02649 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
APOEP02649 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.72□□□□□ -1.65
APOEP02649 AC091178.1-203ENST00000584586 279 ntBASIC4.72□□□□□ -1.65
APOEP02649 ADAD1P2-201ENST00000588476 646 ntBASIC4.72□□□□□ -1.65
APOEP02649 RPL12P25-202ENST00000598100 674 ntBASIC4.72□□□□□ -1.65
APOEP02649 AC008782.1-201ENST00000603386 430 ntBASIC4.72□□□□□ -1.65
APOEP02649 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.72□□□□□ -1.65
APOEP02649 AC010435.1-201ENST00000623353 1177 ntBASIC4.72□□□□□ -1.65
APOEP02649 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms