Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 HMGN2P25-201ENST00000486956 268 ntBASIC3.84□□□□□ -1.79
UPK1BO75841 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.84□□□□□ -1.79
UPK1BO75841 AC108145.1-201ENST00000503770 153 ntBASIC3.84□□□□□ -1.79
UPK1BO75841 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.84□□□□□ -1.79
UPK1BO75841 AC113191.1-201ENST00000517759 403 ntBASIC3.84□□□□□ -1.79
UPK1BO75841 AC116917.1-201ENST00000520558 305 ntBASIC3.84□□□□□ -1.79
UPK1BO75841 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC3.84□□□□□ -1.79
UPK1BO75841 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.84□□□□□ -1.79
UPK1BO75841 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.84□□□□□ -1.79
UPK1BO75841 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC3.84□□□□□ -1.79
UPK1BO75841 AC010547.6-201ENST00000571789 193 ntBASIC3.84□□□□□ -1.79
UPK1BO75841 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC3.84□□□□□ -1.79
UPK1BO75841 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC3.84□□□□□ -1.79
UPK1BO75841 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC3.84□□□□□ -1.79
UPK1BO75841 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC3.84□□□□□ -1.79
UPK1BO75841 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.84□□□□□ -1.79
UPK1BO75841 AC004948.1-201ENST00000609858 672 ntBASIC3.84□□□□□ -1.79
UPK1BO75841 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC3.84□□□□□ -1.79
UPK1BO75841 AC007204.1-201ENST00000621794 555 ntBASIC3.84□□□□□ -1.79
UPK1BO75841 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.84□□□□□ -1.79
UPK1BO75841 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC3.84□□□□□ -1.79
UPK1BO75841 OR11H5P-202ENST00000641612 1325 ntBASIC3.84□□□□□ -1.79
UPK1BO75841 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
UPK1BO75841 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
UPK1BO75841 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
UPK1BO75841 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.84□□□□□ -1.8
UPK1BO75841 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
UPK1BO75841 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
UPK1BO75841 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
UPK1BO75841 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
UPK1BO75841 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.83□□□□□ -1.8
UPK1BO75841 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
UPK1BO75841 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.83□□□□□ -1.8
UPK1BO75841 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
UPK1BO75841 SNORA17.1-201ENST00000362945 126 ntBASIC3.83□□□□□ -1.8
UPK1BO75841 RNU6-1251P-201ENST00000364502 107 ntBASIC3.83□□□□□ -1.8
UPK1BO75841 U3.30-201ENST00000391308 210 ntBASIC3.83□□□□□ -1.8
UPK1BO75841 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.83□□□□□ -1.8
UPK1BO75841 CXADRP1-201ENST00000398098 1095 ntBASIC3.83□□□□□ -1.8
UPK1BO75841 AP000357.1-201ENST00000409926 1165 ntBASIC3.83□□□□□ -1.8
UPK1BO75841 AL591848.1-201ENST00000413092 322 ntBASIC3.83□□□□□ -1.8
UPK1BO75841 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.83□□□□□ -1.8
UPK1BO75841 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
UPK1BO75841 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.83□□□□□ -1.8
UPK1BO75841 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.83□□□□□ -1.8
UPK1BO75841 HIGD1AP8-201ENST00000453927 274 ntBASIC3.83□□□□□ -1.8
UPK1BO75841 RPL7AP52-201ENST00000458096 790 ntBASIC3.83□□□□□ -1.8
UPK1BO75841 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.83□□□□□ -1.8
UPK1BO75841 RN7SL319P-201ENST00000480656 221 ntBASIC3.83□□□□□ -1.8
UPK1BO75841 RN7SL568P-201ENST00000493069 298 ntBASIC3.83□□□□□ -1.8
UPK1BO75841 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.83□□□□□ -1.8
UPK1BO75841 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.83□□□□□ -1.8
UPK1BO75841 AC010342.1-201ENST00000514047 877 ntBASIC3.83□□□□□ -1.8
UPK1BO75841 MAL2-208ENST00000523307 556 ntTSL 4 BASIC3.83□□□□□ -1.8
UPK1BO75841 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC3.83□□□□□ -1.8
UPK1BO75841 AC027544.3-201ENST00000535082 757 ntBASIC3.83□□□□□ -1.8
UPK1BO75841 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.83□□□□□ -1.8
UPK1BO75841 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.83□□□□□ -1.8
UPK1BO75841 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.83□□□□□ -1.8
UPK1BO75841 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
UPK1BO75841 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.83□□□□□ -1.8
UPK1BO75841 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
UPK1BO75841 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC3.83□□□□□ -1.8
UPK1BO75841 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC3.83□□□□□ -1.8
UPK1BO75841 SUGT1P3-202ENST00000604259 383 ntBASIC3.83□□□□□ -1.8
UPK1BO75841 CXADRP3-202ENST00000617265 1100 ntBASIC3.83□□□□□ -1.8
UPK1BO75841 TEX41-279ENST00000629149 609 ntTSL 5 BASIC3.83□□□□□ -1.8
UPK1BO75841 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.83□□□□□ -1.8
UPK1BO75841 RPS4XP5-202ENST00000449995 1334 ntBASIC3.83□□□□□ -1.8
UPK1BO75841 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
UPK1BO75841 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
UPK1BO75841 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.83□□□□□ -1.8
UPK1BO75841 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.83□□□□□ -1.8
UPK1BO75841 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.83□□□□□ -1.8
UPK1BO75841 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
UPK1BO75841 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
UPK1BO75841 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
UPK1BO75841 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
UPK1BO75841 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
UPK1BO75841 AC107027.3-201ENST00000565095 3473 ntBASIC3.83□□□□□ -1.8
UPK1BO75841 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.83□□□□□ -1.8
UPK1BO75841 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
UPK1BO75841 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
UPK1BO75841 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
UPK1BO75841 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.82□□□□□ -1.8
UPK1BO75841 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.82□□□□□ -1.8
UPK1BO75841 AC132825.1-201ENST00000463573 2247 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.82□□□□□ -1.8
UPK1BO75841 AC009313.2-201ENST00000417893 1941 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 NCAPGP1-201ENST00000505112 1814 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
UPK1BO75841 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
UPK1BO75841 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
UPK1BO75841 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
UPK1BO75841 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
UPK1BO75841 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
UPK1BO75841 RN7SKP250-201ENST00000363924 321 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 AC019155.1-201ENST00000382242 574 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms