Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.44□□□□□ -1.7
HCN1O60741 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HCN1O60741 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.44□□□□□ -1.7
HCN1O60741 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.44□□□□□ -1.7
HCN1O60741 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.44□□□□□ -1.7
HCN1O60741 AC009268.1-201ENST00000561352 1203 ntBASIC4.44□□□□□ -1.7
HCN1O60741 SNORA74C-1-201ENST00000580726 201 ntBASIC4.44□□□□□ -1.7
HCN1O60741 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.44□□□□□ -1.7
HCN1O60741 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.44□□□□□ -1.7
HCN1O60741 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.44□□□□□ -1.7
HCN1O60741 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.44□□□□□ -1.7
HCN1O60741 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.44□□□□□ -1.7
HCN1O60741 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.44□□□□□ -1.7
HCN1O60741 MIR6748-201ENST00000610433 71 ntBASIC4.44□□□□□ -1.7
HCN1O60741 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HCN1O60741 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.44□□□□□ -1.7
HCN1O60741 AC140113.4-201ENST00000622087 222 ntBASIC4.44□□□□□ -1.7
HCN1O60741 AC015722.2-201ENST00000622210 551 ntBASIC4.44□□□□□ -1.7
HCN1O60741 AC010435.1-201ENST00000623353 1177 ntBASIC4.44□□□□□ -1.7
HCN1O60741 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.44□□□□□ -1.7
HCN1O60741 BMS1P21-201ENST00000634565 365 ntBASIC4.44□□□□□ -1.7
HCN1O60741 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.44□□□□□ -1.7
HCN1O60741 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HCN1O60741 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HCN1O60741 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
HCN1O60741 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.44□□□□□ -1.7
HCN1O60741 AL451142.2-201ENST00000429076 2090 ntBASIC4.44□□□□□ -1.7
HCN1O60741 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HCN1O60741 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
HCN1O60741 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.44□□□□□ -1.7
HCN1O60741 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.43□□□□□ -1.7
HCN1O60741 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HCN1O60741 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HCN1O60741 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HCN1O60741 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HCN1O60741 RNU6-618P-201ENST00000363518 112 ntBASIC4.43□□□□□ -1.7
HCN1O60741 RNA5SP28-201ENST00000363841 119 ntBASIC4.43□□□□□ -1.7
HCN1O60741 RNA5SP372-201ENST00000390836 115 ntBASIC4.43□□□□□ -1.7
HCN1O60741 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HCN1O60741 CYB5AP4-201ENST00000396692 399 ntBASIC4.43□□□□□ -1.7
HCN1O60741 AC004448.2-201ENST00000422360 586 ntBASIC4.43□□□□□ -1.7
HCN1O60741 GTF2IP2-201ENST00000424290 697 ntBASIC4.43□□□□□ -1.7
HCN1O60741 AC004938.1-201ENST00000438468 308 ntBASIC4.43□□□□□ -1.7
HCN1O60741 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.43□□□□□ -1.7
HCN1O60741 AC234781.3-201ENST00000452540 973 ntBASIC4.43□□□□□ -1.7
HCN1O60741 AL513533.1-201ENST00000453728 415 ntBASIC4.43□□□□□ -1.7
HCN1O60741 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.43□□□□□ -1.7
HCN1O60741 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.43□□□□□ -1.7
HCN1O60741 AC011005.3-201ENST00000491624 395 ntBASIC4.43□□□□□ -1.7
HCN1O60741 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
HCN1O60741 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.43□□□□□ -1.7
HCN1O60741 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HCN1O60741 OR7H2P-201ENST00000513483 306 ntBASIC4.43□□□□□ -1.7
HCN1O60741 RNU6-319P-201ENST00000516025 108 ntBASIC4.43□□□□□ -1.7
HCN1O60741 SEC11B-201ENST00000518383 499 ntBASIC4.43□□□□□ -1.7
HCN1O60741 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.43□□□□□ -1.7
HCN1O60741 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.43□□□□□ -1.7
HCN1O60741 AC137768.1-201ENST00000549998 553 ntBASIC4.43□□□□□ -1.7
HCN1O60741 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.43□□□□□ -1.7
HCN1O60741 GLRXP2-201ENST00000555594 321 ntBASIC4.43□□□□□ -1.7
HCN1O60741 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.43□□□□□ -1.7
HCN1O60741 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.43□□□□□ -1.7
HCN1O60741 AC020915.5-201ENST00000596836 964 ntBASIC4.43□□□□□ -1.7
HCN1O60741 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.43□□□□□ -1.7
HCN1O60741 AC090948.2-201ENST00000607363 564 ntBASIC4.43□□□□□ -1.7
HCN1O60741 MIR6780A-201ENST00000615089 68 ntBASIC4.43□□□□□ -1.7
HCN1O60741 AC234782.5-201ENST00000617723 324 ntBASIC4.43□□□□□ -1.7
HCN1O60741 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.43□□□□□ -1.7
HCN1O60741 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.43□□□□□ -1.7
HCN1O60741 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
HCN1O60741 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.43□□□□□ -1.7
HCN1O60741 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
HCN1O60741 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HCN1O60741 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HCN1O60741 AC090017.1-201ENST00000548612 1779 ntBASIC4.42□□□□□ -1.7
HCN1O60741 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HCN1O60741 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HCN1O60741 AC008758.3-201ENST00000507003 1829 ntBASIC4.42□□□□□ -1.7
HCN1O60741 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.42□□□□□ -1.7
HCN1O60741 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HCN1O60741 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HCN1O60741 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HCN1O60741 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HCN1O60741 SNORD96B-201ENST00000386148 79 ntBASIC4.42□□□□□ -1.7
HCN1O60741 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HCN1O60741 MIR298-201ENST00000401212 88 ntBASIC4.42□□□□□ -1.7
HCN1O60741 AL139039.2-201ENST00000407436 479 ntBASIC4.42□□□□□ -1.7
HCN1O60741 RPL6P29-201ENST00000414863 865 ntBASIC4.42□□□□□ -1.7
HCN1O60741 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.42□□□□□ -1.7
HCN1O60741 BX510359.2-201ENST00000417920 305 ntBASIC4.42□□□□□ -1.7
HCN1O60741 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.42□□□□□ -1.7
HCN1O60741 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.42□□□□□ -1.7
HCN1O60741 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.42□□□□□ -1.7
HCN1O60741 RPL23AP4-201ENST00000427757 463 ntBASIC4.42□□□□□ -1.7
HCN1O60741 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.42□□□□□ -1.7
HCN1O60741 NRBF2P3-201ENST00000432731 865 ntBASIC4.42□□□□□ -1.7
HCN1O60741 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.42□□□□□ -1.7
HCN1O60741 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.42□□□□□ -1.7
HCN1O60741 RPL12P46-201ENST00000436610 195 ntBASIC4.42□□□□□ -1.7
HCN1O60741 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms