Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AC073137.1-201ENST00000605636 634 ntBASIC4.49□□□□□ -1.69
LMX1BO60663 AC080013.6-201ENST00000606185 215 ntBASIC4.49□□□□□ -1.69
LMX1BO60663 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.49□□□□□ -1.69
LMX1BO60663 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.49□□□□□ -1.69
LMX1BO60663 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
LMX1BO60663 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.49□□□□□ -1.69
LMX1BO60663 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.49□□□□□ -1.69
LMX1BO60663 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.49□□□□□ -1.69
LMX1BO60663 LINC01739-205ENST00000641890 573 ntBASIC4.49□□□□□ -1.69
LMX1BO60663 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.49□□□□□ -1.69
LMX1BO60663 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LMX1BO60663 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
LMX1BO60663 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LMX1BO60663 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.49□□□□□ -1.69
LMX1BO60663 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.49□□□□□ -1.69
LMX1BO60663 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.49□□□□□ -1.69
LMX1BO60663 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
LMX1BO60663 AC104623.2-202ENST00000623477 4002 ntBASIC4.49□□□□□ -1.69
LMX1BO60663 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
LMX1BO60663 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
LMX1BO60663 MFSD8-213ENST00000641134 1327 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.48□□□□□ -1.69
LMX1BO60663 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.48□□□□□ -1.69
LMX1BO60663 OR55B1P-203ENST00000641518 2602 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
LMX1BO60663 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.48□□□□□ -1.69
LMX1BO60663 AC092747.4-201ENST00000620519 1861 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
LMX1BO60663 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
LMX1BO60663 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
LMX1BO60663 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
LMX1BO60663 SNORA17.1-201ENST00000362945 126 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 RNA5SP90-201ENST00000364801 99 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LMX1BO60663 SNORA56-201ENST00000383966 129 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 RNU1-74P-201ENST00000384108 171 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LMX1BO60663 RN7SKP97-201ENST00000410966 333 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.48□□□□□ -1.69
LMX1BO60663 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.48□□□□□ -1.69
LMX1BO60663 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.48□□□□□ -1.69
LMX1BO60663 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.48□□□□□ -1.69
LMX1BO60663 AC104333.2-201ENST00000422630 192 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LMX1BO60663 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.48□□□□□ -1.69
LMX1BO60663 EI24P4-201ENST00000423683 1078 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 OSTCP5-201ENST00000425293 453 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.48□□□□□ -1.69
LMX1BO60663 RBMY2QP-201ENST00000429799 1147 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.48□□□□□ -1.69
LMX1BO60663 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.48□□□□□ -1.69
LMX1BO60663 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.48□□□□□ -1.69
LMX1BO60663 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.48□□□□□ -1.69
LMX1BO60663 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
LMX1BO60663 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.48□□□□□ -1.69
LMX1BO60663 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.48□□□□□ -1.69
LMX1BO60663 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.48□□□□□ -1.69
LMX1BO60663 TPT1P1-201ENST00000458495 518 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 AC104629.2-201ENST00000468627 598 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 RPS29P22-201ENST00000472363 168 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.48□□□□□ -1.69
LMX1BO60663 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LMX1BO60663 RPL21P47-201ENST00000483696 477 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 AC083982.1-201ENST00000485679 344 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 AC007686.1-201ENST00000488511 463 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.48□□□□□ -1.69
LMX1BO60663 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
LMX1BO60663 RN7SKP147-201ENST00000517154 244 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 AC020937.1-201ENST00000519677 1013 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.48□□□□□ -1.69
LMX1BO60663 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.48□□□□□ -1.69
LMX1BO60663 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.48□□□□□ -1.69
LMX1BO60663 OR10V3P-201ENST00000525712 725 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.48□□□□□ -1.69
LMX1BO60663 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.48□□□□□ -1.69
LMX1BO60663 AC010735.1-201ENST00000567305 1026 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.48□□□□□ -1.69
LMX1BO60663 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LMX1BO60663 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.48□□□□□ -1.69
LMX1BO60663 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.48□□□□□ -1.69
LMX1BO60663 PCNAP1-202ENST00000595299 752 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 AP004372.1-201ENST00000604842 844 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 AC005084.1-201ENST00000605160 304 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 AC107952.2-201ENST00000606048 486 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 AC231759.1-201ENST00000616455 597 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 AC004232.3-201ENST00000622977 525 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.48□□□□□ -1.69
LMX1BO60663 AC104985.3-201ENST00000623479 597 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 AC138965.3-201ENST00000623875 498 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.48□□□□□ -1.69
LMX1BO60663 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.48□□□□□ -1.69
LMX1BO60663 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.48□□□□□ -1.69
LMX1BO60663 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.48□□□□□ -1.69
LMX1BO60663 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
LMX1BO60663 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LMX1BO60663 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.48□□□□□ -1.69
LMX1BO60663 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.48□□□□□ -1.69
LMX1BO60663 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LMX1BO60663 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms