Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ZIC3O60481 AL138820.1-201ENST00000617901 5305 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
ZIC3O60481 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
ZIC3O60481 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ZIC3O60481 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ZIC3O60481 RNU4-28P-201ENST00000364739 141 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 MIR513B-201ENST00000385136 84 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 U3.23-201ENST00000391132 200 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 MTCO1P56-201ENST00000401674 224 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.64□□□□□ -1.67
ZIC3O60481 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.64□□□□□ -1.67
ZIC3O60481 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.64□□□□□ -1.67
ZIC3O60481 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.64□□□□□ -1.67
ZIC3O60481 KRR1P1-201ENST00000419430 803 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 AC093162.1-201ENST00000419682 124 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 MTND2P16-201ENST00000419987 799 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 OR2X1P-201ENST00000421144 687 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 YWHAEP5-201ENST00000431545 765 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 PSMD10P3-201ENST00000437000 448 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.64□□□□□ -1.67
ZIC3O60481 CEACAMP7-201ENST00000444105 496 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.64□□□□□ -1.67
ZIC3O60481 PTGES3P5-201ENST00000455109 434 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 AC093166.2-201ENST00000455969 1017 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 RNU7-140P-201ENST00000459546 60 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.64□□□□□ -1.67
ZIC3O60481 RPL7AP6-201ENST00000477943 801 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 HMGN2P25-201ENST00000486956 268 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.64□□□□□ -1.67
ZIC3O60481 AC023050.1-201ENST00000498198 304 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.64□□□□□ -1.67
ZIC3O60481 AC004980.4-201ENST00000513375 203 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.64□□□□□ -1.67
ZIC3O60481 AC083923.1-201ENST00000523708 376 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.64□□□□□ -1.67
ZIC3O60481 AC023538.1-201ENST00000534576 736 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ZIC3O60481 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.64□□□□□ -1.67
ZIC3O60481 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.64□□□□□ -1.67
ZIC3O60481 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.64□□□□□ -1.67
ZIC3O60481 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.64□□□□□ -1.67
ZIC3O60481 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ZIC3O60481 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.64□□□□□ -1.67
ZIC3O60481 AC007448.1-201ENST00000582714 234 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ZIC3O60481 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.64□□□□□ -1.67
ZIC3O60481 GAS5-AS1-201ENST00000602767 694 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 AC113368.1-201ENST00000603736 382 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 AL035411.2-201ENST00000604022 421 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 ELOCP35-201ENST00000604289 336 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 AC002487.1-201ENST00000604565 994 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
ZIC3O60481 STMN1P1-201ENST00000617809 440 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 AC048344.4-201ENST00000619744 527 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.64□□□□□ -1.67
ZIC3O60481 U6.107-201ENST00000637108 79 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
ZIC3O60481 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
ZIC3O60481 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ZIC3O60481 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ZIC3O60481 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.64□□□□□ -1.67
ZIC3O60481 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ZIC3O60481 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ZIC3O60481 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
ZIC3O60481 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ZIC3O60481 AC073055.1-201ENST00000456901 1621 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ZIC3O60481 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
ZIC3O60481 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ZIC3O60481 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ZIC3O60481 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
ZIC3O60481 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
ZIC3O60481 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.63□□□□□ -1.67
ZIC3O60481 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
ZIC3O60481 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.63□□□□□ -1.67
ZIC3O60481 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.63□□□□□ -1.67
ZIC3O60481 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
ZIC3O60481 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ZIC3O60481 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.63□□□□□ -1.67
ZIC3O60481 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ZIC3O60481 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ZIC3O60481 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
ZIC3O60481 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ZIC3O60481 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
ZIC3O60481 RNU4-51P-201ENST00000364206 140 ntBASIC4.63□□□□□ -1.67
ZIC3O60481 RNU6-353P-201ENST00000364266 108 ntBASIC4.63□□□□□ -1.67
ZIC3O60481 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ZIC3O60481 RNU6-98P-201ENST00000384173 107 ntBASIC4.63□□□□□ -1.67
ZIC3O60481 SNORA5.1-201ENST00000384275 131 ntBASIC4.63□□□□□ -1.67
ZIC3O60481 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
ZIC3O60481 TAS2R15P-201ENST00000390674 928 ntBASIC4.63□□□□□ -1.67
ZIC3O60481 LINC01881-201ENST00000416103 412 ntBASIC4.63□□□□□ -1.67
ZIC3O60481 RPL22P18-201ENST00000417197 377 ntBASIC4.63□□□□□ -1.67
ZIC3O60481 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.63□□□□□ -1.67
ZIC3O60481 AC005005.2-201ENST00000420779 380 ntBASIC4.63□□□□□ -1.67
ZIC3O60481 DDX39BP1-205ENST00000422507 192 ntBASIC4.63□□□□□ -1.67
ZIC3O60481 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.63□□□□□ -1.67
ZIC3O60481 AC022022.1-201ENST00000430304 178 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms