Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.34□□□□□ -1.55
PROM1O43490 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.34□□□□□ -1.55
PROM1O43490 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.34□□□□□ -1.55
PROM1O43490 AC024909.2-201ENST00000553035 286 ntBASIC5.34□□□□□ -1.55
PROM1O43490 AL049870.4-201ENST00000555741 486 ntBASIC5.34□□□□□ -1.55
PROM1O43490 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.34□□□□□ -1.55
PROM1O43490 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.34□□□□□ -1.55
PROM1O43490 MIR4311-201ENST00000580794 100 ntBASIC5.34□□□□□ -1.55
PROM1O43490 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.34□□□□□ -1.55
PROM1O43490 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.34□□□□□ -1.55
PROM1O43490 AL163642.2-201ENST00000604722 1019 ntBASIC5.34□□□□□ -1.55
PROM1O43490 AC124312.4-201ENST00000605533 310 ntBASIC5.34□□□□□ -1.55
PROM1O43490 AL353600.1-201ENST00000608148 251 ntBASIC5.34□□□□□ -1.55
PROM1O43490 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.34□□□□□ -1.55
PROM1O43490 AC015712.7-201ENST00000615211 635 ntBASIC5.34□□□□□ -1.55
PROM1O43490 AP004607.9-201ENST00000618202 316 ntBASIC5.34□□□□□ -1.55
PROM1O43490 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.34□□□□□ -1.55
PROM1O43490 MIR193BHG-214ENST00000641765 509 ntBASIC5.34□□□□□ -1.55
PROM1O43490 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.34□□□□□ -1.55
PROM1O43490 OR13C1P-202ENST00000641378 2919 ntBASIC5.34□□□□□ -1.55
PROM1O43490 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
PROM1O43490 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PROM1O43490 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PROM1O43490 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PROM1O43490 AC010266.2-201ENST00000564741 3255 ntBASIC5.34□□□□□ -1.55
PROM1O43490 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PROM1O43490 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
PROM1O43490 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PROM1O43490 AL022311.1-201ENST00000623726 19416 ntBASIC5.34□□□□□ -1.56
PROM1O43490 AC005332.5-201ENST00000591222 2919 ntBASIC5.34□□□□□ -1.56
PROM1O43490 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PROM1O43490 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.34□□□□□ -1.56
PROM1O43490 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PROM1O43490 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PROM1O43490 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.33□□□□□ -1.56
PROM1O43490 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.33□□□□□ -1.56
PROM1O43490 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PROM1O43490 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PROM1O43490 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.33□□□□□ -1.56
PROM1O43490 AP001029.2-203ENST00000589795 4910 ntBASIC5.33□□□□□ -1.56
PROM1O43490 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.33□□□□□ -1.56
PROM1O43490 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PROM1O43490 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PROM1O43490 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PROM1O43490 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PROM1O43490 GAPDHP24-201ENST00000328713 983 ntBASIC5.33□□□□□ -1.56
PROM1O43490 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PROM1O43490 AL121886.1-201ENST00000358609 435 ntBASIC5.33□□□□□ -1.56
PROM1O43490 RNA5SP326-201ENST00000363209 110 ntBASIC5.33□□□□□ -1.56
PROM1O43490 RNA5SP131-201ENST00000365452 119 ntBASIC5.33□□□□□ -1.56
PROM1O43490 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.33□□□□□ -1.56
PROM1O43490 LINC01347-201ENST00000417964 355 ntBASIC5.33□□□□□ -1.56
PROM1O43490 RPA2P2-201ENST00000419698 796 ntBASIC5.33□□□□□ -1.56
PROM1O43490 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.33□□□□□ -1.56
PROM1O43490 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.33□□□□□ -1.56
PROM1O43490 OR6K4P-201ENST00000423179 955 ntBASIC5.33□□□□□ -1.56
PROM1O43490 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.33□□□□□ -1.56
PROM1O43490 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.33□□□□□ -1.56
PROM1O43490 TMEM183AP1-205ENST00000432739 290 ntBASIC5.33□□□□□ -1.56
PROM1O43490 AC093716.1-201ENST00000435923 377 ntBASIC5.33□□□□□ -1.56
PROM1O43490 AC005297.1-201ENST00000444765 862 ntBASIC5.33□□□□□ -1.56
PROM1O43490 AL050341.1-201ENST00000447743 313 ntBASIC5.33□□□□□ -1.56
PROM1O43490 AC092685.1-201ENST00000447960 1243 ntBASIC5.33□□□□□ -1.56
PROM1O43490 AL596266.1-201ENST00000448132 400 ntBASIC5.33□□□□□ -1.56
PROM1O43490 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.33□□□□□ -1.56
PROM1O43490 MTND1P27-201ENST00000451117 902 ntBASIC5.33□□□□□ -1.56
PROM1O43490 MTCO3P16-201ENST00000454456 754 ntBASIC5.33□□□□□ -1.56
PROM1O43490 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.33□□□□□ -1.56
PROM1O43490 MTCYBP37-201ENST00000510642 1133 ntBASIC5.33□□□□□ -1.56
PROM1O43490 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.33□□□□□ -1.56
PROM1O43490 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.33□□□□□ -1.56
PROM1O43490 IGHV3-63-201ENST00000518422 341 ntBASIC5.33□□□□□ -1.56
PROM1O43490 MTCO3P15-201ENST00000526563 574 ntBASIC5.33□□□□□ -1.56
PROM1O43490 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.33□□□□□ -1.56
PROM1O43490 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.33□□□□□ -1.56
PROM1O43490 ELOCP32-201ENST00000548625 324 ntBASIC5.33□□□□□ -1.56
PROM1O43490 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.33□□□□□ -1.56
PROM1O43490 IGBP1P1-201ENST00000554337 1009 ntBASIC5.33□□□□□ -1.56
PROM1O43490 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.33□□□□□ -1.56
PROM1O43490 RBM22P12-201ENST00000567098 1255 ntBASIC5.33□□□□□ -1.56
PROM1O43490 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
PROM1O43490 MIR4660-201ENST00000583549 74 ntBASIC5.33□□□□□ -1.56
PROM1O43490 AL590229.1-201ENST00000603497 542 ntBASIC5.33□□□□□ -1.56
PROM1O43490 AL392112.1-201ENST00000605115 829 ntBASIC5.33□□□□□ -1.56
PROM1O43490 AL450489.1-201ENST00000612071 468 ntBASIC5.33□□□□□ -1.56
PROM1O43490 AC011815.3-201ENST00000624194 473 ntBASIC5.33□□□□□ -1.56
PROM1O43490 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PROM1O43490 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PROM1O43490 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PROM1O43490 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PROM1O43490 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.33□□□□□ -1.56
PROM1O43490 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PROM1O43490 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PROM1O43490 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PROM1O43490 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.33□□□□□ -1.56
PROM1O43490 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PROM1O43490 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PROM1O43490 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PROM1O43490 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PROM1O43490 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms