Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.71□□□□□ -1.82
SDCBPO00560 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.71□□□□□ -1.82
SDCBPO00560 ARAFP1-201ENST00000422172 605 ntBASIC3.71□□□□□ -1.82
SDCBPO00560 AL360081.1-201ENST00000428299 555 ntBASIC3.71□□□□□ -1.82
SDCBPO00560 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC3.71□□□□□ -1.82
SDCBPO00560 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC3.71□□□□□ -1.82
SDCBPO00560 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.71□□□□□ -1.82
SDCBPO00560 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.71□□□□□ -1.82
SDCBPO00560 RPS27AP17-201ENST00000463344 455 ntBASIC3.71□□□□□ -1.82
SDCBPO00560 RPL12P20-201ENST00000475538 479 ntBASIC3.71□□□□□ -1.82
SDCBPO00560 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.71□□□□□ -1.82
SDCBPO00560 PHBP17-201ENST00000528576 541 ntBASIC3.71□□□□□ -1.82
SDCBPO00560 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
SDCBPO00560 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.71□□□□□ -1.82
SDCBPO00560 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.71□□□□□ -1.82
SDCBPO00560 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.71□□□□□ -1.82
SDCBPO00560 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.71□□□□□ -1.82
SDCBPO00560 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.71□□□□□ -1.82
SDCBPO00560 AL133406.3-201ENST00000606817 541 ntBASIC3.71□□□□□ -1.82
SDCBPO00560 AC091953.3-201ENST00000623220 236 ntBASIC3.71□□□□□ -1.82
SDCBPO00560 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC3.71□□□□□ -1.82
SDCBPO00560 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SDCBPO00560 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SDCBPO00560 MTND4P26-201ENST00000415971 1359 ntBASIC3.71□□□□□ -1.82
SDCBPO00560 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.71□□□□□ -1.82
SDCBPO00560 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.71□□□□□ -1.82
SDCBPO00560 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC3.71□□□□□ -1.82
SDCBPO00560 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SDCBPO00560 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.7□□□□□ -1.82
SDCBPO00560 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SDCBPO00560 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.7□□□□□ -1.82
SDCBPO00560 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.7□□□□□ -1.82
SDCBPO00560 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.7□□□□□ -1.82
SDCBPO00560 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SDCBPO00560 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
SDCBPO00560 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SDCBPO00560 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SDCBPO00560 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SDCBPO00560 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.7□□□□□ -1.82
SDCBPO00560 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SDCBPO00560 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SDCBPO00560 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.7□□□□□ -1.82
SDCBPO00560 RNA5SP397-201ENST00000391323 118 ntBASIC3.7□□□□□ -1.82
SDCBPO00560 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.7□□□□□ -1.82
SDCBPO00560 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.7□□□□□ -1.82
SDCBPO00560 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.7□□□□□ -1.82
SDCBPO00560 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.7□□□□□ -1.82
SDCBPO00560 AC006466.1-201ENST00000438721 289 ntBASIC3.7□□□□□ -1.82
SDCBPO00560 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.7□□□□□ -1.82
SDCBPO00560 AL162591.2-201ENST00000449634 317 ntBASIC3.7□□□□□ -1.82
SDCBPO00560 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.7□□□□□ -1.82
SDCBPO00560 RPL7AP10-201ENST00000481016 791 ntBASIC3.7□□□□□ -1.82
SDCBPO00560 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.7□□□□□ -1.82
SDCBPO00560 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.7□□□□□ -1.82
SDCBPO00560 AP001781.1-201ENST00000530977 207 ntBASIC3.7□□□□□ -1.82
SDCBPO00560 OR5D15P-201ENST00000531671 942 ntBASIC3.7□□□□□ -1.82
SDCBPO00560 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.7□□□□□ -1.82
SDCBPO00560 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.7□□□□□ -1.82
SDCBPO00560 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.7□□□□□ -1.82
SDCBPO00560 AC051619.2-201ENST00000559063 397 ntBASIC3.7□□□□□ -1.82
SDCBPO00560 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.7□□□□□ -1.82
SDCBPO00560 RPL23AP97-201ENST00000568955 471 ntBASIC3.7□□□□□ -1.82
SDCBPO00560 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.7□□□□□ -1.82
SDCBPO00560 MIR4480-201ENST00000582492 71 ntBASIC3.7□□□□□ -1.82
SDCBPO00560 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.7□□□□□ -1.82
SDCBPO00560 AC005034.4-201ENST00000603612 899 ntBASIC3.7□□□□□ -1.82
SDCBPO00560 AL049539.1-201ENST00000611964 459 ntBASIC3.7□□□□□ -1.82
SDCBPO00560 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC3.7□□□□□ -1.82
SDCBPO00560 AL133243.1-201ENST00000614487 366 ntBASIC3.7□□□□□ -1.82
SDCBPO00560 LINC00901.1-201ENST00000617252 152 ntBASIC3.7□□□□□ -1.82
SDCBPO00560 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.7□□□□□ -1.82
SDCBPO00560 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SDCBPO00560 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
SDCBPO00560 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.7□□□□□ -1.82
SDCBPO00560 CASC19-255ENST00000641733 1385 ntBASIC3.7□□□□□ -1.82
SDCBPO00560 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SDCBPO00560 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC3.7□□□□□ -1.82
SDCBPO00560 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.7□□□□□ -1.82
SDCBPO00560 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
SDCBPO00560 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SDCBPO00560 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
SDCBPO00560 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SDCBPO00560 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SDCBPO00560 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.7□□□□□ -1.82
SDCBPO00560 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC3.7□□□□□ -1.82
SDCBPO00560 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.7□□□□□ -1.82
SDCBPO00560 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SDCBPO00560 VN2R3P-201ENST00000422626 1412 ntBASIC3.7□□□□□ -1.82
SDCBPO00560 AC068254.2-201ENST00000623938 3577 ntBASIC3.69□□□□□ -1.82
SDCBPO00560 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.69□□□□□ -1.82
SDCBPO00560 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SDCBPO00560 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SDCBPO00560 AL592182.3-201ENST00000642132 3304 ntBASIC3.69□□□□□ -1.82
SDCBPO00560 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SDCBPO00560 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SDCBPO00560 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SDCBPO00560 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SDCBPO00560 RNU2-50P-201ENST00000410494 143 ntBASIC3.69□□□□□ -1.82
SDCBPO00560 SNORA74C-2-201ENST00000411179 201 ntBASIC3.69□□□□□ -1.82
SDCBPO00560 AC007394.1-201ENST00000421941 531 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms