Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 CHIAP3-201ENST00000423668 1133 ntBASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 SETP10-201ENST00000424368 814 ntBASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC083829.1-201ENST00000503756 657 ntBASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC138701.1-201ENST00000524329 714 ntBASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC020910.2-201ENST00000603635 610 ntBASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 AL121873.1-201ENST00000616013 524 ntBASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC234782.5-201ENST00000617723 324 ntBASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC015804.1-201ENST00000622935 435 ntBASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 U3.53-201ENST00000628922 216 ntBASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC006453.5-201ENST00000636451 619 ntBASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC016588.2-201ENST00000632484 3021 ntBASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TMX2-CTNND1H3BSU7 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 AL136164.3-201ENST00000624429 3978 ntBASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 OR4K17-201ENST00000315543 1032 ntBASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 RNU1-82P-201ENST00000390851 165 ntBASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 HDGFP1-201ENST00000405943 252 ntBASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 AL139039.2-201ENST00000407436 479 ntBASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 RNU4-25P-201ENST00000410569 230 ntBASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC004448.2-201ENST00000422360 586 ntBASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 AL645608.4-201ENST00000423619 154 ntBASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC234779.1-201ENST00000425910 285 ntBASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC097523.2-201ENST00000435551 652 ntBASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC106806.2-201ENST00000509365 500 ntBASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC026688.1-201ENST00000520639 1168 ntBASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC087477.6-201ENST00000559595 843 ntBASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC008782.1-201ENST00000603386 430 ntBASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC005962.2-201ENST00000611427 652 ntBASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.5□□□□□ -1.69
TMX2-CTNND1H3BSU7 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 OR14L1P-202ENST00000641545 3009 ntBASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 SYT14P1-202ENST00000600441 1448 ntBASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 GAPDHP49-201ENST00000421421 961 ntBASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 AL356387.2-201ENST00000422272 243 ntBASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 AL732292.1-201ENST00000426692 226 ntBASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC011998.1-201ENST00000433403 117 ntBASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 NMNAT1P2-201ENST00000435192 860 ntBASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 ARL4AP3-201ENST00000441452 574 ntBASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC090142.1-201ENST00000465776 462 ntBASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC010618.1-201ENST00000469924 477 ntBASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC109327.1-201ENST00000471666 403 ntBASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC007537.2-201ENST00000472093 511 ntBASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC104763.1-201ENST00000475274 360 ntBASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 RPL7AP10-201ENST00000481016 791 ntBASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 NIP7P2-201ENST00000485801 544 ntBASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 AP000827.1-201ENST00000527814 258 ntBASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC023043.4-201ENST00000612081 449 ntBASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TMX2-CTNND1H3BSU7 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms