Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 NIPA2P1-201ENST00000426223 976 ntBASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 MTND4LP7-201ENST00000431728 294 ntBASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 AC234781.3-201ENST00000452540 973 ntBASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 HMGB1P4-201ENST00000455362 567 ntBASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 PGBD4P4-201ENST00000509673 613 ntBASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 AC108120.2-201ENST00000512973 294 ntBASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 AC068714.1-201ENST00000559623 800 ntBASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 BX005214.3-202ENST00000619809 325 ntBASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 AC010435.1-201ENST00000623353 1177 ntBASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
NPIPA2E9PIF3 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 AC025574.1-201ENST00000554784 1653 ntBASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 ECM1P2-201ENST00000503354 1577 ntBASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 AC011447.7-201ENST00000624228 1590 ntBASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 RNU4-39P-201ENST00000362455 127 ntBASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 RNU6-666P-201ENST00000363499 107 ntBASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 RNVU1-6-201ENST00000364688 164 ntBASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 ATP5HP3-201ENST00000396994 486 ntBASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 AC013442.1-201ENST00000397347 228 ntBASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 RPS16P5-201ENST00000406501 404 ntBASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 RNA5SP113-201ENST00000410486 84 ntBASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 AC016397.1-201ENST00000412463 242 ntBASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 GTF2IP5-201ENST00000414608 731 ntBASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 RPL6P29-201ENST00000414863 865 ntBASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 FAM204CP-201ENST00000424489 642 ntBASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 IPMKP1-201ENST00000425988 855 ntBASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 AC007559.1-201ENST00000428736 355 ntBASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 RPL34P6-201ENST00000432390 345 ntBASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 AC093414.1-201ENST00000434712 514 ntBASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 AC023512.1-201ENST00000444513 499 ntBASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 SLC25A18P1-201ENST00000449385 454 ntBASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 AL691482.1-201ENST00000453255 87 ntBASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 NDUFA12P1-201ENST00000455914 406 ntBASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 AC022795.1-201ENST00000473808 480 ntBASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 AC108157.1-201ENST00000510511 539 ntBASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 SNRPGP1-201ENST00000553864 222 ntBASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 AC123786.2-201ENST00000603459 275 ntBASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 AL049794.2-201ENST00000616301 365 ntBASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA2E9PIF3 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms