Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 CASC19-222ENST00000641321 1173 ntBASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 AC016588.2-201ENST00000632484 3021 ntBASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 CASC19-255ENST00000641733 1385 ntBASIC4.4□□□□□ -1.71
TRIM49D1C9J1S8 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 AC027228.2-201ENST00000567141 2154 ntBASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 AC068254.2-201ENST00000623938 3577 ntBASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 GAPDHP15-201ENST00000398586 975 ntBASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 AC016769.2-201ENST00000414815 475 ntBASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 PSMD10P3-201ENST00000437000 448 ntBASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 RN7SL826P-201ENST00000479724 288 ntBASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 AP005119.2-201ENST00000579735 1105 ntBASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 MIR6891-201ENST00000618788 93 ntBASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 AC132825.1-201ENST00000463573 2247 ntBASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM49D1C9J1S8 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 SDAD1P1-202ENST00000524156 2051 ntBASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 SNORD66.1-201ENST00000391230 76 ntBASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 SNRPFP1-201ENST00000414761 252 ntBASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 AC069285.2-201ENST00000440210 275 ntBASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 OR51K1P-201ENST00000510214 950 ntBASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 PARP4P3-201ENST00000510265 317 ntBASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 MIR432-201ENST00000606207 94 ntBASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 AC090510.2-201ENST00000617465 629 ntBASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 AC006840.1-201ENST00000623069 542 ntBASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM49D1C9J1S8 KPNA2P2-201ENST00000419546 1489 ntBASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 SNORD74.4-201ENST00000364129 80 ntBASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 GLULP6-201ENST00000399502 913 ntBASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 SNORA81-201ENST00000408493 178 ntBASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 PTP4A1P1-201ENST00000420539 515 ntBASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 AC006455.6-201ENST00000426192 893 ntBASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 RPL31P44-201ENST00000447680 377 ntBASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 OR9N1P-201ENST00000491296 333 ntBASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 AC108145.1-201ENST00000503770 153 ntBASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 RFPL4AP3-201ENST00000515267 345 ntBASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 AC022784.5-201ENST00000522241 437 ntBASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 OR5M7P-201ENST00000526140 972 ntBASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM49D1C9J1S8 AL352979.3-201ENST00000553515 247 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms