Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AC018555.1-201ENST00000567548 1980 ntBASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 RN7SKP115-201ENST00000363177 317 ntBASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 RNU6-304P-201ENST00000364855 107 ntBASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AP000534.2-201ENST00000412729 568 ntBASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AL590806.1-201ENST00000415818 853 ntBASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AC019050.1-201ENST00000418508 492 ntBASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AL133325.1-201ENST00000421090 382 ntBASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AL391219.1-201ENST00000422570 483 ntBASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 MTND2P11-201ENST00000423638 648 ntBASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 CYCSP6-201ENST00000434498 302 ntBASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 MTCYBP29-201ENST00000436327 1006 ntBASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AC012075.1-201ENST00000436549 580 ntBASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 EIF4A1P6-201ENST00000448133 1210 ntBASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AL606490.1-201ENST00000452266 765 ntBASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 RNU6-1218P-201ENST00000458990 108 ntBASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 RPL35AP19-201ENST00000469425 329 ntBASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 RN7SL97P-201ENST00000486780 299 ntBASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AC108693.1-201ENST00000496068 432 ntBASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 MGST2-204ENST00000506797 634 ntTSL 2 BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AC108471.1-201ENST00000513977 287 ntBASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 ATP5LP3-201ENST00000514223 304 ntBASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AC004825.1-201ENST00000555068 586 ntBASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AC124068.1-201ENST00000563131 678 ntBASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AC105254.2-201ENST00000603636 436 ntBASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AC090953.1-201ENST00000604305 1092 ntBASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AC010245.2-201ENST00000606908 1167 ntBASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AC005840.5-201ENST00000619166 599 ntBASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 AL031119.1-201ENST00000404707 1879 ntBASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
RBFOX3A6NFN3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 RNU6-146P-201ENST00000384602 108 ntBASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 ZNF603P-201ENST00000405613 487 ntBASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 RPL23AP48-201ENST00000406913 488 ntBASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 RNU6ATAC18P-201ENST00000408413 101 ntBASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 RN7SKP222-201ENST00000410651 315 ntBASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 RPS23P10-201ENST00000416185 486 ntBASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 PRELID3BP10-201ENST00000431957 584 ntBASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 GSTA7P-201ENST00000438425 448 ntBASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 RPL31P20-201ENST00000449593 360 ntBASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 RPL7P45-201ENST00000455851 743 ntBASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 AC079804.1-201ENST00000461922 436 ntBASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 AC021205.1-201ENST00000468797 348 ntBASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 AC116562.1-201ENST00000485355 781 ntBASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 AC146944.2-203ENST00000502493 354 ntBASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 TRIM36-IT1-201ENST00000503723 881 ntBASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 AC139495.1-202ENST00000513164 354 ntBASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 RNU6-347P-201ENST00000516658 105 ntBASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.63□□□□□ -1.83
RBFOX3A6NFN3 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms