Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 RPL12P25-202ENST00000598100 674 ntBASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AL034374.2-201ENST00000605281 548 ntBASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AL008729.2-201ENST00000606393 473 ntBASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AL133243.1-201ENST00000614487 366 ntBASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 SNX18P1Y-201ENST00000616231 511 ntBASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.64□□□□□ -1.83
TCRBV4S1A1TA0A5B7 HCFC2P1-201ENST00000392864 1592 ntBASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC091046.3-201ENST00000631455 1574 ntBASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC139713.2-214ENST00000642059 1811 ntBASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 RNA5SP447-201ENST00000363749 119 ntBASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 RPL23AP1-201ENST00000428990 471 ntBASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 RPL23AP25-201ENST00000430973 463 ntBASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC073143.1-201ENST00000436316 395 ntBASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 RPL21P133-201ENST00000443666 476 ntBASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 RPS23P7-201ENST00000466210 444 ntBASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC090589.1-201ENST00000473109 362 ntBASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC015795.1-201ENST00000513669 327 ntBASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC090151.1-201ENST00000520784 730 ntBASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AP001781.1-201ENST00000530977 207 ntBASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 OR56B2P-202ENST00000641377 2453 ntBASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 NR1H5P-201ENST00000452683 1377 ntBASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.63□□□□□ -1.83
TCRBV4S1A1TA0A5B7 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 KPNA2P2-201ENST00000419546 1489 ntBASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 MGP-201ENST00000228938 694 ntTSL 3 BASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 MIR129-1-201ENST00000384972 72 ntBASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 OR1F12-201ENST00000402365 945 ntBASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC091390.1-201ENST00000433904 331 ntBASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 PSMC1P13-201ENST00000458195 985 ntBASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC135999.1-201ENST00000478962 479 ntBASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 MTND4LP2-201ENST00000502312 285 ntBASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC100770.1-201ENST00000532310 322 ntBASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.62□□□□□ -1.83
TCRBV4S1A1TA0A5B7 PARP1P2-201ENST00000556806 195 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms