Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC073594.1-201ENST00000462065 364 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 RPS17P15-201ENST00000475609 349 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 GAPDHP36-201ENST00000480688 918 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 AC126121.1-201ENST00000482313 553 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 LINC00888-204ENST00000487386 421 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 AC008629.2-201ENST00000503783 483 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 ST13P12-201ENST00000508958 1094 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 AC048346.1-201ENST00000510247 144 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 AC079395.1-201ENST00000510981 262 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 ELOCP32-201ENST00000548625 324 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 AC018552.1-201ENST00000562099 811 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 MIR4505-201ENST00000582238 73 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 PIGPP4-201ENST00000584447 307 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 AC020916.2-201ENST00000591242 360 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 FO393422.1-201ENST00000603908 708 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 AC121247.2-201ENST00000604776 136 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 AC080013.6-201ENST00000606185 215 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 AL355816.1-201ENST00000607951 118 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 RN7SL544P-201ENST00000617232 284 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 RN7SL763P-201ENST00000620922 284 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 AC124312.6-202ENST00000623624 418 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 AC099654.6-201ENST00000636487 512 ntBASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.65□□□□□ -1.5
PCDHGA3Q9Y5H0 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.65□□□□□ -1.51
PCDHGA3Q9Y5H0 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.65□□□□□ -1.51
PCDHGA3Q9Y5H0 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
PCDHGA3Q9Y5H0 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
PCDHGA3Q9Y5H0 AC018809.2-201ENST00000602436 3823 ntBASIC5.65□□□□□ -1.51
PCDHGA3Q9Y5H0 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.65□□□□□ -1.51
PCDHGA3Q9Y5H0 MAPK10-328ENST00000641553 4009 ntBASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 PARP4P2-201ENST00000446672 3326 ntBASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AC138907.8-201ENST00000623981 2256 ntBASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 CASC19-204ENST00000641001 2055 ntBASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AP000776.1-201ENST00000530032 1663 ntBASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 RNU6-1066P-201ENST00000363573 105 ntBASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 RNU6-272P-201ENST00000411028 104 ntBASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AC127526.2-201ENST00000426436 775 ntBASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AL390023.1-201ENST00000428836 262 ntBASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AL163193.1-201ENST00000444895 788 ntBASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AL109741.2-201ENST00000455561 343 ntBASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 RPL7P18-201ENST00000478965 734 ntBASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AC099521.1-201ENST00000482557 334 ntBASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AC008885.2-201ENST00000509506 930 ntBASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AC008837.2-201ENST00000513076 418 ntBASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 HIGD1AP6-201ENST00000521833 279 ntBASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 IGKV2-18-201ENST00000522607 343 ntBASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 IGBP1P1-201ENST00000554337 1009 ntBASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 DUXAP11-201ENST00000603858 526 ntBASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AL022394.1-201ENST00000606979 292 ntBASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AC084782.3-201ENST00000612282 578 ntBASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 AL139099.4-201ENST00000614802 114 ntBASIC5.64□□□□□ -1.51
PCDHGA3Q9Y5H0 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms