Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 GAPDHP39-201ENST00000481866 979 ntBASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 RN7SL30P-201ENST00000488416 306 ntBASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 HIGD1AP14-201ENST00000507617 282 ntBASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 AC093815.1-201ENST00000508637 280 ntBASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 IGJP1-201ENST00000522682 475 ntBASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 AC010306.1-201ENST00000523223 1117 ntBASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 MRPS16P1-201ENST00000523462 412 ntBASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 AP001317.1-201ENST00000531194 960 ntBASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 H3F3BP2-201ENST00000583907 357 ntBASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 AC121247.2-201ENST00000604776 136 ntBASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 AC107075.1-201ENST00000613695 314 ntBASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 AC023509.5-201ENST00000617434 807 ntBASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 AL157770.1-201ENST00000623049 439 ntBASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 AC067852.7-201ENST00000623270 535 ntBASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 AC092608.3-201ENST00000625017 386 ntBASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 AC103706.2-201ENST00000638080 240 ntBASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 LINC01963-201ENST00000562038 3148 ntBASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 SMG1P7-201ENST00000565246 2704 ntBASIC5.59□□□□□ -1.52
PCDHB1Q9Y5F3 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PCDHB1Q9Y5F3 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 AP005901.5-201ENST00000545779 1796 ntBASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 RNA5SP443-201ENST00000363083 132 ntBASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 RNA5SP326-201ENST00000363209 110 ntBASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 AC093719.1-202ENST00000392735 373 ntBASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 RN7SKP216-201ENST00000411050 312 ntBASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 AL445213.1-201ENST00000412589 747 ntBASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 MTND4P22-201ENST00000413116 1169 ntBASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 RPS26P30-201ENST00000443431 335 ntBASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 LINC02210-201ENST00000444561 288 ntBASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 MTND1P29-201ENST00000448112 647 ntBASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 AC005532.2-201ENST00000467154 373 ntBASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 AC100832.1-201ENST00000471945 383 ntBASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 OR5H4P-201ENST00000510851 923 ntBASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 AC093755.1-201ENST00000512950 1023 ntBASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 AC122688.1-201ENST00000541494 223 ntBASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 HSPE1P2-201ENST00000554777 306 ntBASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 AC008015.1-201ENST00000555505 465 ntBASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 AL390726.5-202ENST00000564800 256 ntBASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 AC090312.2-201ENST00000582687 378 ntBASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 BNIP3P26-201ENST00000600827 554 ntBASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 AC015726.1-201ENST00000602353 681 ntBASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 AL451086.1-201ENST00000605596 223 ntBASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 AC105227.2-201ENST00000615075 605 ntBASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 AC006840.1-201ENST00000623069 542 ntBASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 CASC19-264ENST00000641912 1184 ntBASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 PWAR1-201ENST00000624188 2414 ntBASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 AL592429.1-201ENST00000403909 1473 ntBASIC5.58□□□□□ -1.52
PCDHB1Q9Y5F3 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms