Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC021646.1-201ENST00000605469 484 ntBASIC6.93□□□□□ -1.3
PCDHB11Q9Y5F2 AC122710.3-201ENST00000606566 541 ntBASIC6.93□□□□□ -1.3
PCDHB11Q9Y5F2 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC6.93□□□□□ -1.3
PCDHB11Q9Y5F2 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.93□□□□□ -1.3
PCDHB11Q9Y5F2 AL122125.1-201ENST00000616999 600 ntBASIC6.93□□□□□ -1.3
PCDHB11Q9Y5F2 7SK.10-201ENST00000621414 298 ntBASIC6.93□□□□□ -1.3
PCDHB11Q9Y5F2 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC6.93□□□□□ -1.3
PCDHB11Q9Y5F2 ATM-228ENST00000639240 498 ntTSL 5 BASIC6.93□□□□□ -1.3
PCDHB11Q9Y5F2 CASC19-232ENST00000641480 1244 ntBASIC6.93□□□□□ -1.3
PCDHB11Q9Y5F2 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDHB11Q9Y5F2 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDHB11Q9Y5F2 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
PCDHB11Q9Y5F2 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PCDHB11Q9Y5F2 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.93□□□□□ -1.3
PCDHB11Q9Y5F2 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
PCDHB11Q9Y5F2 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDHB11Q9Y5F2 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.93□□□□□ -1.3
PCDHB11Q9Y5F2 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.93□□□□□ -1.3
PCDHB11Q9Y5F2 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PCDHB11Q9Y5F2 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.93□□□□□ -1.3
PCDHB11Q9Y5F2 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDHB11Q9Y5F2 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PCDHB11Q9Y5F2 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 RIOK3P1-201ENST00000418778 1528 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 AC092111.1-201ENST00000618256 3358 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 OR5P1P-201ENST00000299512 925 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 NACAP2-201ENST00000318548 624 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 RNA5SP472-201ENST00000363868 119 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 RNU6-317P-201ENST00000384031 107 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 Y_RNA.459-201ENST00000384251 102 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 MIR187-201ENST00000385062 109 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 RNU6-952P-201ENST00000391164 108 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 RNA5SP53-201ENST00000391299 120 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 SUMO2P13-201ENST00000403109 272 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 RNU2-62P-201ENST00000410868 191 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 RPL35AP24-201ENST00000413846 330 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 OR1AA1P-201ENST00000419597 916 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 AL390728.3-201ENST00000452704 270 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 RN7SL502P-201ENST00000481857 290 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 OR9A1P-202ENST00000484361 945 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 AC090096.1-201ENST00000489168 390 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 AC108693.1-201ENST00000496068 432 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 Y_RNA.711-201ENST00000516993 102 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 IGKV2-36-201ENST00000519999 223 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 AP003072.2-201ENST00000527756 676 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 ARL6IP1P1-201ENST00000545836 610 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 SULT1C2P1-202ENST00000562418 459 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 HMGB1P6-201ENST00000569046 646 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 AC092032.1-201ENST00000603090 165 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 AC012629.3-201ENST00000623397 328 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 AL078596.1-201ENST00000624856 447 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 CDRT1-208ENST00000630868 794 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 AL034408.1-201ENST00000637712 664 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 AL356585.10-201ENST00000641883 123 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 HDAC1P2-201ENST00000453661 1398 ntBASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
PCDHB11Q9Y5F2 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms