Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 RPL7P33-201ENST00000444159 742 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AC092691.2-201ENST00000461787 803 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 RNA5SP49-201ENST00000516450 115 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AP000916.1-201ENST00000533869 835 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AC006960.3-201ENST00000561845 705 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AC010327.2-201ENST00000587647 488 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 UBA2-208ENST00000592791 910 ntTSL 2 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 OR2AS2P-201ENST00000606902 342 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 ZFYVE26-201ENST00000347230 9675 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 CEP170P1-201ENST00000502249 4587 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 XGY1-201ENST00000381172 446 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 RPL7AP49-201ENST00000429522 581 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AL591438.1-201ENST00000433508 581 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 PTMAP3-201ENST00000447474 330 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 RPL27AP5-201ENST00000469428 449 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AC095038.3-201ENST00000634439 195 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 ST8SIA3-201ENST00000324000 11833 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 LDHAL6CP-202ENST00000550738 3224 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AL078595.2-201ENST00000605309 1780 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AC087650.1-201ENST00000431445 468 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 HAR1A.1-201ENST00000459583 118 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AC005412.2-201ENST00000492004 341 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AL592156.1-201ENST00000508758 304 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 SMG1P6-201ENST00000532337 2930 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 PCDHA4-204ENST00000618834 10557 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AL079305.1-201ENST00000623159 3008 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 CASC19-261ENST00000641853 1638 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 RNA5SP120-201ENST00000410900 112 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 ATP5A1P2-201ENST00000412323 255 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 SLC31A1P1-201ENST00000451221 567 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 RPL32P34-201ENST00000486380 400 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AC135721.1-201ENST00000497954 479 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 STMN1P2-201ENST00000508435 439 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AC006557.5-201ENST00000603126 811 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AC046143.2-201ENST00000609789 160 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AL133243.3-201ENST00000617415 3004 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 MAPK10-338ENST00000641647 3362 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 RPS17P11-201ENST00000474297 293 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 MRPS5P4-201ENST00000592830 325 ntBASIC1.77□□□□□ -2.13
MACF1Q9UPN3 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
MACF1Q9UPN3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms