Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.15□□□□□ -1.59
LRFN1Q9P244 ZNF663P-202ENST00000641770 1131 ntBASIC5.15□□□□□ -1.59
LRFN1Q9P244 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LRFN1Q9P244 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LRFN1Q9P244 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LRFN1Q9P244 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.15□□□□□ -1.59
LRFN1Q9P244 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
LRFN1Q9P244 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
LRFN1Q9P244 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LRFN1Q9P244 AL450326.2-201ENST00000421913 1962 ntBASIC5.15□□□□□ -1.59
LRFN1Q9P244 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LRFN1Q9P244 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
LRFN1Q9P244 MFSD8-220ENST00000641243 1422 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.14□□□□□ -1.59
LRFN1Q9P244 GVINP1-202ENST00000531871 7271 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LRFN1Q9P244 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LRFN1Q9P244 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LRFN1Q9P244 AL359955.1-201ENST00000455242 3275 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
LRFN1Q9P244 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRFN1Q9P244 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.14□□□□□ -1.59
LRFN1Q9P244 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.14□□□□□ -1.59
LRFN1Q9P244 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRFN1Q9P244 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRFN1Q9P244 RNU4-92P-201ENST00000363783 136 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 RN7SKP6-201ENST00000364795 319 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 RNA5SP91-201ENST00000390902 119 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.14□□□□□ -1.59
LRFN1Q9P244 AP002530.1-201ENST00000405705 684 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
LRFN1Q9P244 RNU4-34P-201ENST00000410431 124 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LRFN1Q9P244 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.14□□□□□ -1.59
LRFN1Q9P244 AL590609.2-201ENST00000421430 368 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.14□□□□□ -1.59
LRFN1Q9P244 CNOT7P1-201ENST00000429006 852 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 AC073410.1-201ENST00000435125 589 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.14□□□□□ -1.59
LRFN1Q9P244 GTF2IP7-202ENST00000436677 309 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.14□□□□□ -1.59
LRFN1Q9P244 PTMAP6-201ENST00000439110 327 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.14□□□□□ -1.59
LRFN1Q9P244 Z73417.1-201ENST00000447373 778 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 RPS27AP15-201ENST00000447672 466 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.14□□□□□ -1.59
LRFN1Q9P244 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.14□□□□□ -1.59
LRFN1Q9P244 AC090114.3-201ENST00000479267 829 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 RPS7P6-201ENST00000485777 579 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LRFN1Q9P244 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.14□□□□□ -1.59
LRFN1Q9P244 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.14□□□□□ -1.59
LRFN1Q9P244 IGLV3-24-201ENST00000517477 197 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.14□□□□□ -1.59
LRFN1Q9P244 CDC42P3-201ENST00000518493 633 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.14□□□□□ -1.59
LRFN1Q9P244 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.14□□□□□ -1.59
LRFN1Q9P244 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.14□□□□□ -1.59
LRFN1Q9P244 OR4A2P-201ENST00000527276 913 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.14□□□□□ -1.59
LRFN1Q9P244 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
LRFN1Q9P244 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.14□□□□□ -1.59
LRFN1Q9P244 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.14□□□□□ -1.59
LRFN1Q9P244 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.14□□□□□ -1.59
LRFN1Q9P244 AC015688.2-201ENST00000584523 262 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 FKBP1AP1-201ENST00000594588 318 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 AC012616.1-201ENST00000600294 197 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 AC234772.3-201ENST00000602277 528 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 AC016877.3-201ENST00000606778 504 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 AL445423.1-201ENST00000609941 536 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 AC016769.4-201ENST00000616893 535 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 AC243756.2-201ENST00000618406 463 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.14□□□□□ -1.59
LRFN1Q9P244 AC006927.4-201ENST00000639187 543 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 CASC19-264ENST00000641912 1184 ntBASIC5.14□□□□□ -1.59
LRFN1Q9P244 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRFN1Q9P244 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRFN1Q9P244 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRFN1Q9P244 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRFN1Q9P244 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LRFN1Q9P244 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRFN1Q9P244 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRFN1Q9P244 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.13□□□□□ -1.59
LRFN1Q9P244 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.13□□□□□ -1.59
LRFN1Q9P244 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.13□□□□□ -1.59
LRFN1Q9P244 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.13□□□□□ -1.59
LRFN1Q9P244 AC006484.1-201ENST00000435086 1884 ntBASIC5.13□□□□□ -1.59
LRFN1Q9P244 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.13□□□□□ -1.59
LRFN1Q9P244 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRFN1Q9P244 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
LRFN1Q9P244 LINC01963-201ENST00000562038 3148 ntBASIC5.13□□□□□ -1.59
LRFN1Q9P244 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRFN1Q9P244 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRFN1Q9P244 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRFN1Q9P244 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LRFN1Q9P244 RNA5SP234-201ENST00000363916 119 ntBASIC5.13□□□□□ -1.59
LRFN1Q9P244 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
LRFN1Q9P244 RNU6-171P-201ENST00000384354 107 ntBASIC5.13□□□□□ -1.59
LRFN1Q9P244 SNORA70-201ENST00000384436 135 ntBASIC5.13□□□□□ -1.59
LRFN1Q9P244 GSTA8P-201ENST00000404253 637 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms