Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 RN7SL339P-201ENST00000580597 296 ntBASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 IMMP1LP1-201ENST00000605170 488 ntBASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 AC112484.5-201ENST00000624189 228 ntBASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.82□□□□□ -1.48
PHRF1Q9P1Y6 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 ENSAP1-201ENST00000392855 326 ntBASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 EIF4A1P1-201ENST00000420241 934 ntBASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 AC007389.2-201ENST00000434630 306 ntBASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 DDX39BP2-208ENST00000453923 258 ntBASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 DEFB109A-201ENST00000482450 265 ntBASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 SCARNA13-201ENST00000516672 275 ntBASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 AC091178.1-203ENST00000584586 279 ntBASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 AC017100.2-201ENST00000584628 355 ntBASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 RNA5SP513-201ENST00000364648 118 ntBASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 AC093578.1-201ENST00000415219 368 ntBASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 MTND4LP31-201ENST00000514859 294 ntBASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 TRMT10BP1-201ENST00000519377 943 ntBASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 OR7E10P-201ENST00000526420 991 ntBASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 AC002069.2-201ENST00000603580 883 ntBASIC5.81□□□□□ -1.48
PHRF1Q9P1Y6 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 AC083837.1-201ENST00000565297 2994 ntBASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 AL603750.1-201ENST00000624216 1717 ntBASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 SNORA9-201ENST00000384215 133 ntBASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 RNU11-4P-201ENST00000391149 133 ntBASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 GTF3AP5-201ENST00000442645 697 ntBASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 PARP4P3-201ENST00000510265 317 ntBASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 RNA5SP360-201ENST00000516555 118 ntBASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 OR5BC1P-201ENST00000529327 739 ntBASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 AP000889.1-201ENST00000530968 660 ntBASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 AL121834.1-201ENST00000572284 509 ntBASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 AC025175.1-201ENST00000606482 759 ntBASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 AC007546.2-201ENST00000623996 360 ntBASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PHRF1Q9P1Y6 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PHRF1Q9P1Y6 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PHRF1Q9P1Y6 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PHRF1Q9P1Y6 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PHRF1Q9P1Y6 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
PHRF1Q9P1Y6 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PHRF1Q9P1Y6 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
PHRF1Q9P1Y6 AC115285.1-201ENST00000424879 736 ntBASIC5.79□□□□□ -1.48
PHRF1Q9P1Y6 ARAFP2-201ENST00000440565 559 ntBASIC5.79□□□□□ -1.48
PHRF1Q9P1Y6 RPL5P32-201ENST00000454085 879 ntBASIC5.79□□□□□ -1.48
PHRF1Q9P1Y6 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.79□□□□□ -1.48
PHRF1Q9P1Y6 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.79□□□□□ -1.48
PHRF1Q9P1Y6 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
PHRF1Q9P1Y6 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.79□□□□□ -1.48
PHRF1Q9P1Y6 TVP23BP1-201ENST00000557500 617 ntBASIC5.79□□□□□ -1.48
PHRF1Q9P1Y6 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.79□□□□□ -1.48
PHRF1Q9P1Y6 AC069200.1-201ENST00000609511 323 ntBASIC5.79□□□□□ -1.48
PHRF1Q9P1Y6 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PHRF1Q9P1Y6 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PHRF1Q9P1Y6 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PHRF1Q9P1Y6 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.79□□□□□ -1.48
PHRF1Q9P1Y6 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PHRF1Q9P1Y6 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PHRF1Q9P1Y6 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms