Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
BLOC1S4Q9NUP1 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.44□□□□□ -1.54
BLOC1S4Q9NUP1 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.44□□□□□ -1.54
BLOC1S4Q9NUP1 AL355816.1-201ENST00000607951 118 ntBASIC5.44□□□□□ -1.54
BLOC1S4Q9NUP1 AP001521.2-201ENST00000608772 546 ntBASIC5.44□□□□□ -1.54
BLOC1S4Q9NUP1 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.44□□□□□ -1.54
BLOC1S4Q9NUP1 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
BLOC1S4Q9NUP1 U6.48-201ENST00000618523 106 ntBASIC5.44□□□□□ -1.54
BLOC1S4Q9NUP1 AC091905.4-201ENST00000623432 202 ntBASIC5.44□□□□□ -1.54
BLOC1S4Q9NUP1 AC116563.2-201ENST00000624751 535 ntBASIC5.44□□□□□ -1.54
BLOC1S4Q9NUP1 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.44□□□□□ -1.54
BLOC1S4Q9NUP1 AC112198.2-201ENST00000426589 6996 ntBASIC5.44□□□□□ -1.54
BLOC1S4Q9NUP1 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
BLOC1S4Q9NUP1 ZNF652P1-201ENST00000442420 1309 ntBASIC5.44□□□□□ -1.54
BLOC1S4Q9NUP1 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
BLOC1S4Q9NUP1 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
BLOC1S4Q9NUP1 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 RN7SKP224-201ENST00000364140 325 ntBASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 AL512430.2-201ENST00000406786 339 ntBASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 MTND4P11-201ENST00000417020 1058 ntBASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 AL606495.1-201ENST00000422100 813 ntBASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 NPM1P22-201ENST00000427761 952 ntBASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 CEACAMP7-201ENST00000444105 496 ntBASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 AC112498.1-201ENST00000444401 332 ntBASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 RHEBP2-201ENST00000450289 600 ntBASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 CYCSP53-201ENST00000455540 265 ntBASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 snoU13.20-201ENST00000459180 104 ntBASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 GYG1P1-201ENST00000460864 698 ntBASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 CCDC75P1-201ENST00000469247 791 ntBASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 RN7SL558P-201ENST00000497468 299 ntBASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 GAPDHP56-201ENST00000506031 988 ntBASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 AC147055.3-201ENST00000510547 851 ntBASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 SNORA70.11-201ENST00000515987 138 ntBASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 SNORA70.13-201ENST00000516116 138 ntBASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 BUD31P1-201ENST00000521828 359 ntBASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 AC016180.1-201ENST00000567945 403 ntBASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 AC006272.2-201ENST00000594725 163 ntBASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 AC007497.1-201ENST00000610421 561 ntBASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 MIR7155-201ENST00000615925 56 ntBASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 AC087385.3-201ENST00000620477 187 ntBASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 AC083843.2-201ENST00000568248 6253 ntBASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.43□□□□□ -1.54
BLOC1S4Q9NUP1 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 BTBD10P1-201ENST00000549824 1352 ntBASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 SNORA51.8-201ENST00000384234 132 ntBASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 MIR105-2-201ENST00000385083 81 ntBASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 PTGES3P2-201ENST00000407942 482 ntBASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 EIF4HP2-201ENST00000424380 563 ntBASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 VN1R42P-201ENST00000424651 344 ntBASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 CKS1BP6-201ENST00000424932 240 ntBASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 AC005189.1-201ENST00000431286 310 ntBASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 RPS20P1-201ENST00000434853 354 ntBASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 MTND6P6-201ENST00000478031 263 ntBASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 RNA5SP249-201ENST00000516127 99 ntBASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 Y_RNA.719-201ENST00000517156 106 ntBASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 RNU6-709P-201ENST00000517257 104 ntBASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 AC021006.3-201ENST00000530771 192 ntBASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 OR4R2P-201ENST00000530815 597 ntBASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 AC093249.4-201ENST00000564755 259 ntBASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 AC123768.4-201ENST00000616244 701 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms