Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 RN7SKP106-201ENST00000410832 272 ntBASIC4.87□□□□□ -1.63
SIX2Q9NPC8 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 AL360081.1-201ENST00000428299 555 ntBASIC4.87□□□□□ -1.63
SIX2Q9NPC8 AP001324.1-201ENST00000428553 399 ntBASIC4.87□□□□□ -1.63
SIX2Q9NPC8 ELOCP6-201ENST00000429066 328 ntBASIC4.87□□□□□ -1.63
SIX2Q9NPC8 RPL23AP93-201ENST00000440847 484 ntBASIC4.87□□□□□ -1.63
SIX2Q9NPC8 RPL23AP43-201ENST00000446445 471 ntBASIC4.87□□□□□ -1.63
SIX2Q9NPC8 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 ELOCP12-201ENST00000458706 328 ntBASIC4.87□□□□□ -1.63
SIX2Q9NPC8 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 ARL4AP1-201ENST00000503220 705 ntBASIC4.87□□□□□ -1.63
SIX2Q9NPC8 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 AC020937.1-201ENST00000519677 1013 ntBASIC4.87□□□□□ -1.63
SIX2Q9NPC8 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 OR4V1P-201ENST00000525394 1140 ntBASIC4.87□□□□□ -1.63
SIX2Q9NPC8 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 AL133247.2-201ENST00000603236 482 ntBASIC4.87□□□□□ -1.63
SIX2Q9NPC8 AL133338.2-201ENST00000604292 736 ntBASIC4.87□□□□□ -1.63
SIX2Q9NPC8 AL450270.1-201ENST00000606160 391 ntBASIC4.87□□□□□ -1.63
SIX2Q9NPC8 AC110792.4-201ENST00000609843 298 ntBASIC4.87□□□□□ -1.63
SIX2Q9NPC8 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 AL445493.3-201ENST00000619568 477 ntBASIC4.87□□□□□ -1.63
SIX2Q9NPC8 AC022306.3-201ENST00000619930 550 ntBASIC4.87□□□□□ -1.63
SIX2Q9NPC8 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 CASC19-222ENST00000641321 1173 ntBASIC4.87□□□□□ -1.63
SIX2Q9NPC8 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SIX2Q9NPC8 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
SIX2Q9NPC8 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SIX2Q9NPC8 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.86□□□□□ -1.63
SIX2Q9NPC8 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.86□□□□□ -1.63
SIX2Q9NPC8 DDX18P4-201ENST00000511690 1966 ntBASIC4.86□□□□□ -1.63
SIX2Q9NPC8 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SIX2Q9NPC8 MIR550A3-201ENST00000390735 95 ntBASIC4.86□□□□□ -1.63
SIX2Q9NPC8 RNA5SP397-201ENST00000391323 118 ntBASIC4.86□□□□□ -1.63
SIX2Q9NPC8 CEACAMP8-201ENST00000413902 580 ntBASIC4.86□□□□□ -1.63
SIX2Q9NPC8 MTND4P24-201ENST00000424002 397 ntBASIC4.86□□□□□ -1.63
SIX2Q9NPC8 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.86□□□□□ -1.63
SIX2Q9NPC8 RPEP2-201ENST00000432149 701 ntBASIC4.86□□□□□ -1.63
SIX2Q9NPC8 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.86□□□□□ -1.63
SIX2Q9NPC8 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.86□□□□□ -1.63
SIX2Q9NPC8 Z99127.2-201ENST00000441426 334 ntBASIC4.86□□□□□ -1.63
SIX2Q9NPC8 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.86□□□□□ -1.63
SIX2Q9NPC8 RPS27AP15-201ENST00000447672 466 ntBASIC4.86□□□□□ -1.63
SIX2Q9NPC8 AC105918.1-201ENST00000474399 838 ntBASIC4.86□□□□□ -1.63
SIX2Q9NPC8 RPL23AP65-201ENST00000475608 468 ntBASIC4.86□□□□□ -1.63
SIX2Q9NPC8 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.86□□□□□ -1.63
SIX2Q9NPC8 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.86□□□□□ -1.63
SIX2Q9NPC8 RNU6-319P-201ENST00000516025 108 ntBASIC4.86□□□□□ -1.63
SIX2Q9NPC8 RNU6-889P-201ENST00000517189 103 ntBASIC4.86□□□□□ -1.63
SIX2Q9NPC8 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.86□□□□□ -1.63
SIX2Q9NPC8 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SIX2Q9NPC8 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.86□□□□□ -1.63
SIX2Q9NPC8 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.86□□□□□ -1.63
SIX2Q9NPC8 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.86□□□□□ -1.63
SIX2Q9NPC8 AC106785.3-201ENST00000564064 847 ntBASIC4.86□□□□□ -1.63
SIX2Q9NPC8 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.86□□□□□ -1.63
SIX2Q9NPC8 AP002884.5-201ENST00000595053 1132 ntBASIC4.86□□□□□ -1.63
SIX2Q9NPC8 AP003117.1-201ENST00000602771 554 ntBASIC4.86□□□□□ -1.63
SIX2Q9NPC8 KATNBL1P5-201ENST00000605015 517 ntBASIC4.86□□□□□ -1.63
SIX2Q9NPC8 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.86□□□□□ -1.63
SIX2Q9NPC8 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.86□□□□□ -1.63
SIX2Q9NPC8 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.86□□□□□ -1.63
SIX2Q9NPC8 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.86□□□□□ -1.63
SIX2Q9NPC8 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
SIX2Q9NPC8 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
SIX2Q9NPC8 AC017104.4-201ENST00000636283 1592 ntBASIC4.86□□□□□ -1.63
SIX2Q9NPC8 NOL8P1-201ENST00000508336 3529 ntBASIC4.85□□□□□ -1.63
SIX2Q9NPC8 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SIX2Q9NPC8 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SIX2Q9NPC8 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SIX2Q9NPC8 SNORA70F-201ENST00000384142 135 ntBASIC4.85□□□□□ -1.63
SIX2Q9NPC8 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.85□□□□□ -1.63
SIX2Q9NPC8 ST13P16-201ENST00000401760 781 ntBASIC4.85□□□□□ -1.63
SIX2Q9NPC8 AL355143.1-201ENST00000407101 841 ntBASIC4.85□□□□□ -1.63
SIX2Q9NPC8 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.85□□□□□ -1.63
SIX2Q9NPC8 AL359265.2-201ENST00000434367 631 ntBASIC4.85□□□□□ -1.63
SIX2Q9NPC8 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.85□□□□□ -1.63
SIX2Q9NPC8 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.85□□□□□ -1.63
SIX2Q9NPC8 AP002345.1-201ENST00000456493 928 ntBASIC4.85□□□□□ -1.63
SIX2Q9NPC8 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.85□□□□□ -1.63
SIX2Q9NPC8 AC092905.1-201ENST00000467527 949 ntBASIC4.85□□□□□ -1.63
SIX2Q9NPC8 AC083982.1-201ENST00000485679 344 ntBASIC4.85□□□□□ -1.63
SIX2Q9NPC8 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.85□□□□□ -1.63
SIX2Q9NPC8 AC108022.1-201ENST00000493466 478 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms