Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 RNU6-1331P-201ENST00000363658 106 ntBASIC5.26□□□□□ -1.57
EBF3Q9H4W6 RNVU1-6-201ENST00000364688 164 ntBASIC5.26□□□□□ -1.57
EBF3Q9H4W6 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 UBBP2-201ENST00000376781 231 ntBASIC5.26□□□□□ -1.57
EBF3Q9H4W6 RNU1-74P-201ENST00000384108 171 ntBASIC5.26□□□□□ -1.57
EBF3Q9H4W6 MIR589-201ENST00000385238 99 ntBASIC5.26□□□□□ -1.57
EBF3Q9H4W6 FAR2P2-201ENST00000413041 594 ntBASIC5.26□□□□□ -1.57
EBF3Q9H4W6 AC107081.1-201ENST00000414975 361 ntBASIC5.26□□□□□ -1.57
EBF3Q9H4W6 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 FAR2P4-202ENST00000425399 584 ntBASIC5.26□□□□□ -1.57
EBF3Q9H4W6 RPP40P1-201ENST00000426762 456 ntBASIC5.26□□□□□ -1.57
EBF3Q9H4W6 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 AL137845.2-201ENST00000444292 988 ntBASIC5.26□□□□□ -1.57
EBF3Q9H4W6 AC009220.1-201ENST00000451614 275 ntBASIC5.26□□□□□ -1.57
EBF3Q9H4W6 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 AP002345.1-201ENST00000456493 928 ntBASIC5.26□□□□□ -1.57
EBF3Q9H4W6 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 NPM1P17-201ENST00000479221 602 ntBASIC5.26□□□□□ -1.57
EBF3Q9H4W6 RN7SL319P-201ENST00000480656 221 ntBASIC5.26□□□□□ -1.57
EBF3Q9H4W6 AC093890.1-201ENST00000502554 540 ntBASIC5.26□□□□□ -1.57
EBF3Q9H4W6 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 RNA5SP43-201ENST00000516559 110 ntBASIC5.26□□□□□ -1.57
EBF3Q9H4W6 RNU6-334P-201ENST00000517072 102 ntBASIC5.26□□□□□ -1.57
EBF3Q9H4W6 AC022360.1-201ENST00000521058 340 ntBASIC5.26□□□□□ -1.57
EBF3Q9H4W6 AC100784.1-201ENST00000522790 310 ntBASIC5.26□□□□□ -1.57
EBF3Q9H4W6 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 AC063949.1-201ENST00000552900 865 ntBASIC5.26□□□□□ -1.57
EBF3Q9H4W6 NMNAT1P1-201ENST00000554095 876 ntBASIC5.26□□□□□ -1.57
EBF3Q9H4W6 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 AC245036.5-201ENST00000596330 847 ntBASIC5.26□□□□□ -1.57
EBF3Q9H4W6 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 AC011626.1-201ENST00000604710 562 ntBASIC5.26□□□□□ -1.57
EBF3Q9H4W6 HMGB1P51-201ENST00000605166 638 ntBASIC5.26□□□□□ -1.57
EBF3Q9H4W6 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 AC009501.3-201ENST00000605001 1352 ntBASIC5.26□□□□□ -1.57
EBF3Q9H4W6 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.26□□□□□ -1.57
EBF3Q9H4W6 AC112198.2-201ENST00000426589 6996 ntBASIC5.26□□□□□ -1.57
EBF3Q9H4W6 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.25□□□□□ -1.57
EBF3Q9H4W6 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 OR9G4-201ENST00000302957 984 ntBASIC5.25□□□□□ -1.57
EBF3Q9H4W6 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 MIR365B-201ENST00000362317 111 ntBASIC5.25□□□□□ -1.57
EBF3Q9H4W6 Y_RNA.318-201ENST00000365131 97 ntBASIC5.25□□□□□ -1.57
EBF3Q9H4W6 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 MIR141-201ENST00000384975 95 ntBASIC5.25□□□□□ -1.57
EBF3Q9H4W6 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 AC016397.1-201ENST00000412463 242 ntBASIC5.25□□□□□ -1.57
EBF3Q9H4W6 HIGD1AP15-201ENST00000416198 280 ntBASIC5.25□□□□□ -1.57
EBF3Q9H4W6 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 BX119904.4-201ENST00000424402 301 ntBASIC5.25□□□□□ -1.57
EBF3Q9H4W6 HSPE1P16-201ENST00000426640 348 ntBASIC5.25□□□□□ -1.57
EBF3Q9H4W6 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 MTND4P32-201ENST00000437189 1237 ntBASIC5.25□□□□□ -1.57
EBF3Q9H4W6 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 RSL24D1P3-201ENST00000449255 495 ntBASIC5.25□□□□□ -1.57
EBF3Q9H4W6 TPT1P13-201ENST00000449760 499 ntBASIC5.25□□□□□ -1.57
EBF3Q9H4W6 AC063943.1-201ENST00000465434 453 ntBASIC5.25□□□□□ -1.57
EBF3Q9H4W6 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 SUMO2P4-201ENST00000504193 276 ntBASIC5.25□□□□□ -1.57
EBF3Q9H4W6 AC010350.1-201ENST00000504908 231 ntBASIC5.25□□□□□ -1.57
EBF3Q9H4W6 AC091435.1-201ENST00000505442 584 ntBASIC5.25□□□□□ -1.57
EBF3Q9H4W6 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 HMGB1P47-201ENST00000511281 589 ntBASIC5.25□□□□□ -1.57
EBF3Q9H4W6 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.25□□□□□ -1.57
EBF3Q9H4W6 HAUS1P3-201ENST00000523909 662 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms