Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
BPIFA3Q9BQP9 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
BPIFA3Q9BQP9 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
BPIFA3Q9BQP9 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
BPIFA3Q9BQP9 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
BPIFA3Q9BQP9 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 GLULP6-201ENST00000399502 913 ntBASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 COX6B1P1-201ENST00000415962 213 ntBASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 AC079355.1-201ENST00000421770 223 ntBASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 AL355433.1-201ENST00000422804 300 ntBASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 AP001324.1-201ENST00000428553 399 ntBASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 ELOCP18-201ENST00000434209 337 ntBASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 AP001960.1-201ENST00000506494 658 ntBASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 RNU4-18P-201ENST00000516751 149 ntBASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 AC074276.2-201ENST00000619891 348 ntBASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 AC008785.1-201ENST00000624475 456 ntBASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 OR2L1P-202ENST00000641567 1023 ntBASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
BPIFA3Q9BQP9 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 RN7SKP149-201ENST00000363008 344 ntBASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 AC004552.1-201ENST00000419089 348 ntBASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 NPM1P26-201ENST00000426339 738 ntBASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 AC063943.1-201ENST00000465434 453 ntBASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 RPS26P3-201ENST00000470205 348 ntBASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 RPSAP50-201ENST00000481955 852 ntBASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 AC090543.2-201ENST00000483963 348 ntBASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 AC004057.1-201ENST00000485827 348 ntBASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 AC093763.2-201ENST00000505334 1223 ntBASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 RNA5SP34-201ENST00000516887 130 ntBASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 EDDM3DP-201ENST00000554692 434 ntBASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 AC138907.10-201ENST00000623708 983 ntBASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 MIR4302-201ENST00000638058 60 ntBASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 HSPA8P17-201ENST00000427029 1382 ntBASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
BPIFA3Q9BQP9 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
BPIFA3Q9BQP9 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BPIFA3Q9BQP9 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
BPIFA3Q9BQP9 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.88□□□□□ -1.63
BPIFA3Q9BQP9 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BPIFA3Q9BQP9 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
BPIFA3Q9BQP9 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BPIFA3Q9BQP9 RNA5SP388-201ENST00000362584 119 ntBASIC4.88□□□□□ -1.63
BPIFA3Q9BQP9 MIR659-201ENST00000384963 97 ntBASIC4.88□□□□□ -1.63
BPIFA3Q9BQP9 RN7SKP213-201ENST00000410746 298 ntBASIC4.88□□□□□ -1.63
BPIFA3Q9BQP9 RNA5SP39-201ENST00000411245 120 ntBASIC4.88□□□□□ -1.63
BPIFA3Q9BQP9 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.88□□□□□ -1.63
BPIFA3Q9BQP9 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.88□□□□□ -1.63
BPIFA3Q9BQP9 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.88□□□□□ -1.63
BPIFA3Q9BQP9 NANOGP6-201ENST00000429190 847 ntBASIC4.88□□□□□ -1.63
BPIFA3Q9BQP9 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.88□□□□□ -1.63
BPIFA3Q9BQP9 RPS26P39-201ENST00000469206 341 ntBASIC4.88□□□□□ -1.63
BPIFA3Q9BQP9 RN7SL585P-201ENST00000470538 280 ntBASIC4.88□□□□□ -1.63
BPIFA3Q9BQP9 AC108145.1-201ENST00000503770 153 ntBASIC4.88□□□□□ -1.63
BPIFA3Q9BQP9 AC110775.1-201ENST00000513721 462 ntBASIC4.88□□□□□ -1.63
BPIFA3Q9BQP9 HNRNPKP5-201ENST00000515300 253 ntBASIC4.88□□□□□ -1.63
BPIFA3Q9BQP9 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.88□□□□□ -1.63
BPIFA3Q9BQP9 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.88□□□□□ -1.63
BPIFA3Q9BQP9 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms