Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.71□□□□□ -1.82
LITAFQ99732 AC074255.1-201ENST00000511259 501 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 HMGB3P13-201ENST00000511263 607 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 AL117351.2-201ENST00000513571 157 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC3.71□□□□□ -1.82
LITAFQ99732 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC3.71□□□□□ -1.82
LITAFQ99732 MTCO2P32-201ENST00000514865 403 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 SCARNA20.4-201ENST00000516969 131 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.71□□□□□ -1.82
LITAFQ99732 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.71□□□□□ -1.82
LITAFQ99732 AC246817.2-201ENST00000523971 577 ntTSL 5 BASIC3.71□□□□□ -1.82
LITAFQ99732 FAU-203ENST00000525297 355 ntTSL 5 BASIC3.71□□□□□ -1.82
LITAFQ99732 AC036111.2-201ENST00000533247 901 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC3.71□□□□□ -1.82
LITAFQ99732 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC3.71□□□□□ -1.82
LITAFQ99732 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC3.71□□□□□ -1.82
LITAFQ99732 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.71□□□□□ -1.82
LITAFQ99732 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
LITAFQ99732 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
LITAFQ99732 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.71□□□□□ -1.82
LITAFQ99732 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC3.71□□□□□ -1.82
LITAFQ99732 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
LITAFQ99732 MIR3157-201ENST00000578688 85 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 OR4K7P-201ENST00000580232 945 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 AP005262.1-201ENST00000582646 997 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC3.71□□□□□ -1.82
LITAFQ99732 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.71□□□□□ -1.82
LITAFQ99732 AC036176.3-201ENST00000602456 418 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 AC103881.1-201ENST00000603476 538 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 AC103591.3-201ENST00000608684 209 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC3.71□□□□□ -1.82
LITAFQ99732 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.71□□□□□ -1.82
LITAFQ99732 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 AC024884.1-201ENST00000620583 399 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 AC084035.1-201ENST00000634543 607 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LITAFQ99732 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LITAFQ99732 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LITAFQ99732 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
LITAFQ99732 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
LITAFQ99732 Z99496.1-201ENST00000469424 1477 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.71□□□□□ -1.82
LITAFQ99732 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LITAFQ99732 AC144833.1-201ENST00000567953 4089 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LITAFQ99732 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LITAFQ99732 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
LITAFQ99732 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LITAFQ99732 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC3.71□□□□□ -1.82
LITAFQ99732 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
LITAFQ99732 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
LITAFQ99732 SMG1P7-201ENST00000565246 2704 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 DDX18P4-201ENST00000511690 1966 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LITAFQ99732 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.7□□□□□ -1.82
LITAFQ99732 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
LITAFQ99732 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
LITAFQ99732 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LITAFQ99732 VPS35P1-201ENST00000563400 1518 ntBASIC3.7□□□□□ -1.82
LITAFQ99732 KARSP3-201ENST00000571212 1504 ntBASIC3.7□□□□□ -1.82
LITAFQ99732 FAP-203ENST00000443424 2598 ntTSL 2 BASIC3.7□□□□□ -1.82
LITAFQ99732 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LITAFQ99732 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
LITAFQ99732 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC3.7□□□□□ -1.82
LITAFQ99732 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
LITAFQ99732 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC3.7□□□□□ -1.82
LITAFQ99732 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LITAFQ99732 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC3.7□□□□□ -1.82
LITAFQ99732 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
LITAFQ99732 RPL11P4-201ENST00000332269 436 ntBASIC3.7□□□□□ -1.82
LITAFQ99732 AC023490.2-201ENST00000359859 470 ntBASIC3.7□□□□□ -1.82
LITAFQ99732 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC3.7□□□□□ -1.82
LITAFQ99732 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LITAFQ99732 RNU4-75P-201ENST00000364621 146 ntBASIC3.7□□□□□ -1.82
LITAFQ99732 RNU6-619P-201ENST00000365146 108 ntBASIC3.7□□□□□ -1.82
LITAFQ99732 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC3.7□□□□□ -1.82
LITAFQ99732 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LITAFQ99732 CDC123-202ENST00000378900 933 ntTSL 5 BASIC3.7□□□□□ -1.82
LITAFQ99732 MIR217-201ENST00000384817 110 ntBASIC3.7□□□□□ -1.82
LITAFQ99732 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
LITAFQ99732 EI24P3-201ENST00000399046 1062 ntBASIC3.7□□□□□ -1.82
LITAFQ99732 HMGB3P7-201ENST00000400214 611 ntBASIC3.7□□□□□ -1.82
LITAFQ99732 RN7SKP16-201ENST00000410180 299 ntBASIC3.7□□□□□ -1.82
LITAFQ99732 RNU6-648P-201ENST00000410190 107 ntBASIC3.7□□□□□ -1.82
LITAFQ99732 RNU6-920P-201ENST00000410926 92 ntBASIC3.7□□□□□ -1.82
LITAFQ99732 RPSAP35-201ENST00000413753 818 ntBASIC3.7□□□□□ -1.82
LITAFQ99732 AL596448.1-201ENST00000415024 392 ntBASIC3.7□□□□□ -1.82
LITAFQ99732 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.7□□□□□ -1.82
LITAFQ99732 NPM1P11-201ENST00000417106 855 ntBASIC3.7□□□□□ -1.82
LITAFQ99732 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC3.7□□□□□ -1.82
LITAFQ99732 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.7□□□□□ -1.82
LITAFQ99732 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.7□□□□□ -1.82
LITAFQ99732 MTCO3P30-201ENST00000426425 670 ntBASIC3.7□□□□□ -1.82
LITAFQ99732 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.7□□□□□ -1.82
LITAFQ99732 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.7□□□□□ -1.82
LITAFQ99732 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
LITAFQ99732 AC007679.3-201ENST00000434035 414 ntBASIC3.7□□□□□ -1.82
LITAFQ99732 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms