Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SNX18Q96RF0 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNX18Q96RF0 OR55B1P-203ENST00000641518 2602 ntBASIC5.1□□□□□ -1.59
SNX18Q96RF0 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SNX18Q96RF0 CDC27P2-201ENST00000425026 1922 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 AC000374.1-201ENST00000434698 1745 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SNX18Q96RF0 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SNX18Q96RF0 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SNX18Q96RF0 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 OR52B3P-201ENST00000314715 928 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 NACA3P-201ENST00000359690 648 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 MIR323A-201ENST00000362199 86 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 RNU6-249P-201ENST00000363016 102 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 RNA5SP500-201ENST00000364486 119 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 BMS1P3-201ENST00000372011 932 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SNX18Q96RF0 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SNX18Q96RF0 SNORD116-9-201ENST00000384000 95 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 SNORD116-3-201ENST00000384287 95 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 SNORD116-7-201ENST00000384404 95 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 SNORD116-5-201ENST00000384462 95 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 RNU6-1320P-201ENST00000390838 107 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 RNU6-1269P-201ENST00000391139 107 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SNX18Q96RF0 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 AL512422.1-201ENST00000407033 553 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 RNA5SP487-201ENST00000410186 122 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 AC096921.1-201ENST00000411661 375 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 AL357752.1-201ENST00000412817 349 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 LINC01881-201ENST00000416103 412 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 AK4P4-201ENST00000419465 646 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 MTND6P12-201ENST00000428247 522 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 GAPDHP48-201ENST00000436626 961 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 NDUFS5P5-201ENST00000437256 321 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 PCBP2P1-201ENST00000437262 977 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 UBE2D3P4-201ENST00000441973 436 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 AC118469.1-201ENST00000442943 488 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 AL161636.2-201ENST00000445179 927 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 MTCO2P7-201ENST00000446518 666 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SNX18Q96RF0 AC005002.1-201ENST00000447458 540 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 AC093166.4-201ENST00000457867 318 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 RNU6-599P-201ENST00000459383 107 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 RNU6-1193P-201ENST00000459461 107 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 AC110749.1-201ENST00000462007 357 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 OR5BM1P-201ENST00000512021 366 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 AC117532.1-201ENST00000514638 323 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 AC139365.2-201ENST00000517972 253 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 AC083923.1-201ENST00000523708 376 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 AGGF1P7-201ENST00000562369 913 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 MIR548Y-201ENST00000582739 110 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 AP001542.2-201ENST00000593141 364 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 AC090425.2-201ENST00000608818 501 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 AP000894.4-201ENST00000610185 483 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 AC090607.5-201ENST00000615692 224 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 RNU6-368P-201ENST00000620928 107 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 RNU6-538P-201ENST00000622329 107 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SNX18Q96RF0 AC083843.3-201ENST00000623679 2186 ntBASIC5.09□□□□□ -1.59
SNX18Q96RF0 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
SNX18Q96RF0 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
SNX18Q96RF0 AL731532.2-201ENST00000623542 1953 ntBASIC5.09□□□□□ -1.6
SNX18Q96RF0 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
SNX18Q96RF0 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.6
SNX18Q96RF0 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SNX18Q96RF0 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SNX18Q96RF0 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SNX18Q96RF0 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms