Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS35Q96QK1 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
VPS35Q96QK1 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
VPS35Q96QK1 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS35Q96QK1 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS35Q96QK1 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS35Q96QK1 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS35Q96QK1 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS35Q96QK1 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
VPS35Q96QK1 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS35Q96QK1 RNU6-152P-201ENST00000384037 107 ntBASIC4.7□□□□□ -1.66
VPS35Q96QK1 ARL4AP5-201ENST00000404372 599 ntBASIC4.7□□□□□ -1.66
VPS35Q96QK1 OR51B3P-201ENST00000412287 913 ntBASIC4.7□□□□□ -1.66
VPS35Q96QK1 AL591848.1-201ENST00000413092 322 ntBASIC4.7□□□□□ -1.66
VPS35Q96QK1 AL590806.1-201ENST00000415818 853 ntBASIC4.7□□□□□ -1.66
VPS35Q96QK1 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS35Q96QK1 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.7□□□□□ -1.66
VPS35Q96QK1 AL356806.1-201ENST00000422524 916 ntBASIC4.7□□□□□ -1.66
VPS35Q96QK1 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS35Q96QK1 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS35Q96QK1 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS35Q96QK1 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS35Q96QK1 AC006967.1-201ENST00000467608 589 ntBASIC4.7□□□□□ -1.66
VPS35Q96QK1 AC025164.1-201ENST00000496249 478 ntBASIC4.7□□□□□ -1.66
VPS35Q96QK1 TCP11X3P-202ENST00000514289 1254 ntBASIC4.7□□□□□ -1.66
VPS35Q96QK1 RN7SKP46-201ENST00000515942 234 ntBASIC4.7□□□□□ -1.66
VPS35Q96QK1 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS35Q96QK1 FKBP1BP1-201ENST00000553366 325 ntBASIC4.7□□□□□ -1.66
VPS35Q96QK1 AP005119.2-201ENST00000579735 1105 ntBASIC4.7□□□□□ -1.66
VPS35Q96QK1 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS35Q96QK1 AL137072.1-201ENST00000603444 466 ntBASIC4.7□□□□□ -1.66
VPS35Q96QK1 AC098935.2-201ENST00000604222 466 ntBASIC4.7□□□□□ -1.66
VPS35Q96QK1 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS35Q96QK1 AC116651.1-201ENST00000609724 556 ntBASIC4.7□□□□□ -1.66
VPS35Q96QK1 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.7□□□□□ -1.66
VPS35Q96QK1 MIR6853-201ENST00000619642 74 ntBASIC4.7□□□□□ -1.66
VPS35Q96QK1 AL133243.3-201ENST00000617415 3004 ntBASIC4.7□□□□□ -1.66
VPS35Q96QK1 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS35Q96QK1 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
VPS35Q96QK1 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS35Q96QK1 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS35Q96QK1 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS35Q96QK1 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS35Q96QK1 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
VPS35Q96QK1 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
VPS35Q96QK1 AC139713.2-215ENST00000641428 5037 ntBASIC4.69□□□□□ -1.66
VPS35Q96QK1 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS35Q96QK1 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS35Q96QK1 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
VPS35Q96QK1 AC125257.1-201ENST00000560400 2930 ntBASIC4.69□□□□□ -1.66
VPS35Q96QK1 AC103591.2-201ENST00000265259 766 ntBASIC4.69□□□□□ -1.66
VPS35Q96QK1 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS35Q96QK1 RNVU1-6-201ENST00000364688 164 ntBASIC4.69□□□□□ -1.66
VPS35Q96QK1 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS35Q96QK1 RNU1-82P-201ENST00000390851 165 ntBASIC4.69□□□□□ -1.66
VPS35Q96QK1 ATP5F1P2-201ENST00000398143 760 ntBASIC4.69□□□□□ -1.66
VPS35Q96QK1 AP000580.1-201ENST00000404439 358 ntBASIC4.69□□□□□ -1.66
VPS35Q96QK1 RN7SKP267-201ENST00000410381 285 ntBASIC4.69□□□□□ -1.66
VPS35Q96QK1 AC016769.2-201ENST00000414815 475 ntBASIC4.69□□□□□ -1.66
VPS35Q96QK1 AC073136.2-201ENST00000417282 849 ntBASIC4.69□□□□□ -1.66
VPS35Q96QK1 RPL7P57-201ENST00000423238 740 ntBASIC4.69□□□□□ -1.66
VPS35Q96QK1 AL359265.2-201ENST00000434367 631 ntBASIC4.69□□□□□ -1.66
VPS35Q96QK1 NMNAT1P2-201ENST00000435192 860 ntBASIC4.69□□□□□ -1.66
VPS35Q96QK1 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS35Q96QK1 AC004938.1-201ENST00000438468 308 ntBASIC4.69□□□□□ -1.66
VPS35Q96QK1 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS35Q96QK1 AL031584.1-201ENST00000447169 754 ntBASIC4.69□□□□□ -1.66
VPS35Q96QK1 AL513533.1-201ENST00000453728 415 ntBASIC4.69□□□□□ -1.66
VPS35Q96QK1 AC079168.2-201ENST00000453977 416 ntBASIC4.69□□□□□ -1.66
VPS35Q96QK1 PCNAP1-201ENST00000505363 709 ntBASIC4.69□□□□□ -1.66
VPS35Q96QK1 AC073358.1-201ENST00000505671 684 ntBASIC4.69□□□□□ -1.66
VPS35Q96QK1 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
VPS35Q96QK1 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS35Q96QK1 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS35Q96QK1 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS35Q96QK1 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
VPS35Q96QK1 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS35Q96QK1 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
VPS35Q96QK1 AC105129.1-201ENST00000560250 297 ntBASIC4.69□□□□□ -1.66
VPS35Q96QK1 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS35Q96QK1 MIR4270-201ENST00000581799 70 ntBASIC4.69□□□□□ -1.66
VPS35Q96QK1 AC004948.1-201ENST00000609858 672 ntBASIC4.69□□□□□ -1.66
VPS35Q96QK1 AC100827.5-201ENST00000615883 426 ntBASIC4.69□□□□□ -1.66
VPS35Q96QK1 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS35Q96QK1 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS35Q96QK1 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS35Q96QK1 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS35Q96QK1 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS35Q96QK1 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS35Q96QK1 AC087190.4-201ENST00000574616 8334 ntBASIC4.69□□□□□ -1.66
VPS35Q96QK1 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS35Q96QK1 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS35Q96QK1 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS35Q96QK1 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VPS35Q96QK1 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS35Q96QK1 OR10J6P-201ENST00000289731 930 ntBASIC4.68□□□□□ -1.66
VPS35Q96QK1 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
VPS35Q96QK1 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VPS35Q96QK1 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VPS35Q96QK1 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms