Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RN7SKP244-201ENST00000516513 307 ntBASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 RNU6-506P-201ENST00000516553 94 ntBASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 OR11J2P-201ENST00000555298 907 ntBASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 EIF1P6-201ENST00000600054 334 ntBASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 AC012360.2-201ENST00000609349 391 ntBASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 U4.5-201ENST00000617137 123 ntBASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 AC011815.3-201ENST00000624194 473 ntBASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 AC073869.7-201ENST00000640874 297 ntBASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 MIR193BHG-214ENST00000641765 509 ntBASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
SYNGAP1Q96PV0 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 SELENOWP1-201ENST00000322792 252 ntBASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 RNU6-500P-201ENST00000362349 107 ntBASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 OR1L1-202ENST00000373686 1083 ntBASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 ATG4AP1-201ENST00000416893 538 ntBASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 Z97055.1-201ENST00000419730 712 ntBASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 OFD1P2Y-201ENST00000421895 1149 ntBASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 AC006065.1-201ENST00000422539 802 ntBASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 AC008072.1-201ENST00000434254 824 ntBASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 ARAFP2-201ENST00000440565 559 ntBASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 AC004865.1-201ENST00000442276 1003 ntBASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 EEF1B2P6-201ENST00000445713 673 ntBASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 SSXP1-201ENST00000453640 473 ntBASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 DDX39BP2-208ENST00000453923 258 ntBASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 MTND1P16-201ENST00000465177 898 ntBASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 NDUFA5P12-201ENST00000503796 343 ntBASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 Y_RNA.702-201ENST00000516843 96 ntBASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 DEFB108A-201ENST00000530110 222 ntBASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 TPRKBP2-201ENST00000565969 475 ntBASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 Y_RNA.804-201ENST00000615262 101 ntBASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 AC009704.2-201ENST00000618739 483 ntBASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNGAP1Q96PV0 AL662795.2-201ENST00000624252 3706 ntBASIC6.81□□□□□ -1.32
SYNGAP1Q96PV0 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
SYNGAP1Q96PV0 RNU5F-7P-201ENST00000363696 115 ntBASIC6.81□□□□□ -1.32
SYNGAP1Q96PV0 RN7SKP160-201ENST00000363804 340 ntBASIC6.81□□□□□ -1.32
SYNGAP1Q96PV0 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.81□□□□□ -1.32
SYNGAP1Q96PV0 RNU6-259P-201ENST00000383999 107 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms