Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 RNU1-44P-201ENST00000384453 163 ntBASIC6.18□□□□□ -1.42
CCDC7Q96M83 MIR134-201ENST00000385258 73 ntBASIC6.18□□□□□ -1.42
CCDC7Q96M83 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC7Q96M83 ARL4AP3-201ENST00000441452 574 ntBASIC6.18□□□□□ -1.42
CCDC7Q96M83 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC7Q96M83 DHFRP3-201ENST00000455595 559 ntBASIC6.18□□□□□ -1.42
CCDC7Q96M83 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.18□□□□□ -1.42
CCDC7Q96M83 AC053481.1-201ENST00000467217 306 ntBASIC6.18□□□□□ -1.42
CCDC7Q96M83 RPL7P19-201ENST00000469948 618 ntBASIC6.18□□□□□ -1.42
CCDC7Q96M83 RPL21P129-201ENST00000491732 478 ntBASIC6.18□□□□□ -1.42
CCDC7Q96M83 KATNBL1P4-201ENST00000503545 918 ntBASIC6.18□□□□□ -1.42
CCDC7Q96M83 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.18□□□□□ -1.42
CCDC7Q96M83 IGLVIV-65-201ENST00000517313 360 ntBASIC6.18□□□□□ -1.42
CCDC7Q96M83 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC7Q96M83 AC011477.5-201ENST00000586571 259 ntBASIC6.18□□□□□ -1.42
CCDC7Q96M83 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC7Q96M83 AC006363.1-201ENST00000603806 463 ntBASIC6.18□□□□□ -1.42
CCDC7Q96M83 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC7Q96M83 AC007546.1-201ENST00000619452 559 ntBASIC6.18□□□□□ -1.42
CCDC7Q96M83 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC7Q96M83 ASNSP1-204ENST00000641977 1664 ntBASIC6.18□□□□□ -1.42
CCDC7Q96M83 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC7Q96M83 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC7Q96M83 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC7Q96M83 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC7Q96M83 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC7Q96M83 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC7Q96M83 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC7Q96M83 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC7Q96M83 AC104118.1-201ENST00000607625 1589 ntBASIC6.18□□□□□ -1.42
CCDC7Q96M83 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC7Q96M83 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CCDC7Q96M83 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CCDC7Q96M83 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC7Q96M83 SNORA48.7-201ENST00000391302 135 ntBASIC6.18□□□□□ -1.42
CCDC7Q96M83 RPS29P17-201ENST00000430795 166 ntBASIC6.18□□□□□ -1.42
CCDC7Q96M83 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC7Q96M83 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC7Q96M83 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC7Q96M83 ACTR3P2-201ENST00000439585 1257 ntBASIC6.18□□□□□ -1.42
CCDC7Q96M83 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.18□□□□□ -1.42
CCDC7Q96M83 RPL21P126-201ENST00000470049 478 ntBASIC6.18□□□□□ -1.42
CCDC7Q96M83 RPL23AP65-201ENST00000475608 468 ntBASIC6.18□□□□□ -1.42
CCDC7Q96M83 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC7Q96M83 RN7SL810P-201ENST00000493031 276 ntBASIC6.18□□□□□ -1.42
CCDC7Q96M83 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC7Q96M83 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC7Q96M83 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.18□□□□□ -1.42
CCDC7Q96M83 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC7Q96M83 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
CCDC7Q96M83 AC106785.1-201ENST00000565935 262 ntBASIC6.18□□□□□ -1.42
CCDC7Q96M83 BNIP3P33-201ENST00000598912 569 ntBASIC6.18□□□□□ -1.42
CCDC7Q96M83 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC7Q96M83 AC026979.4-201ENST00000606555 645 ntBASIC6.18□□□□□ -1.42
CCDC7Q96M83 Z98200.1-201ENST00000607298 470 ntBASIC6.18□□□□□ -1.42
CCDC7Q96M83 AP000843.1-201ENST00000624880 701 ntBASIC6.18□□□□□ -1.42
CCDC7Q96M83 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC6.18□□□□□ -1.42
CCDC7Q96M83 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CCDC7Q96M83 AC100871.1-201ENST00000507871 1456 ntBASIC6.17□□□□□ -1.42
CCDC7Q96M83 AC068870.3-201ENST00000625077 2536 ntBASIC6.17□□□□□ -1.42
CCDC7Q96M83 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC7Q96M83 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC7Q96M83 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CCDC7Q96M83 AC017104.4-201ENST00000636283 1592 ntBASIC6.17□□□□□ -1.42
CCDC7Q96M83 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CCDC7Q96M83 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.17□□□□□ -1.42
CCDC7Q96M83 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CCDC7Q96M83 AP001157.1-201ENST00000550837 2339 ntBASIC6.17□□□□□ -1.42
CCDC7Q96M83 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC7Q96M83 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC7Q96M83 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC7Q96M83 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC7Q96M83 RNA5SP372-201ENST00000390836 115 ntBASIC6.17□□□□□ -1.42
CCDC7Q96M83 RN7SKP97-201ENST00000410966 333 ntBASIC6.17□□□□□ -1.42
CCDC7Q96M83 TMSB10P2-201ENST00000416049 131 ntBASIC6.17□□□□□ -1.42
CCDC7Q96M83 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC7Q96M83 AC114495.1-201ENST00000441274 436 ntBASIC6.17□□□□□ -1.42
CCDC7Q96M83 AL359073.1-201ENST00000448036 403 ntBASIC6.17□□□□□ -1.42
CCDC7Q96M83 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC6.17□□□□□ -1.42
CCDC7Q96M83 RPL7AP52-201ENST00000458096 790 ntBASIC6.17□□□□□ -1.42
CCDC7Q96M83 AC108022.1-201ENST00000493466 478 ntBASIC6.17□□□□□ -1.42
CCDC7Q96M83 AC021146.3-201ENST00000511911 260 ntBASIC6.17□□□□□ -1.42
CCDC7Q96M83 MIR2116-201ENST00000517221 80 ntBASIC6.17□□□□□ -1.42
CCDC7Q96M83 HMGB1P23-201ENST00000518743 568 ntBASIC6.17□□□□□ -1.42
CCDC7Q96M83 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC6.17□□□□□ -1.42
CCDC7Q96M83 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC7Q96M83 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC7Q96M83 ARL6IP1P1-201ENST00000545836 610 ntBASIC6.17□□□□□ -1.42
CCDC7Q96M83 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC6.17□□□□□ -1.42
CCDC7Q96M83 5S_rRNA.16-201ENST00000612928 119 ntBASIC6.17□□□□□ -1.42
CCDC7Q96M83 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.17□□□□□ -1.42
CCDC7Q96M83 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCDC7Q96M83 MAPK10-286ENST00000641208 8747 ntBASIC6.17□□□□□ -1.42
CCDC7Q96M83 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC7Q96M83 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CCDC7Q96M83 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CCDC7Q96M83 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC7Q96M83 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC7Q96M83 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC7Q96M83 AC125336.1-201ENST00000508893 2827 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms