Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.75□□□□□ -1.17
LRCH3Q96II8 API5P2-201ENST00000397055 1498 ntBASIC7.75□□□□□ -1.17
LRCH3Q96II8 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LRCH3Q96II8 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
LRCH3Q96II8 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
LRCH3Q96II8 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
LRCH3Q96II8 VPS35P1-201ENST00000563400 1518 ntBASIC7.74□□□□□ -1.17
LRCH3Q96II8 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LRCH3Q96II8 AC003985.2-201ENST00000562268 1669 ntBASIC7.74□□□□□ -1.17
LRCH3Q96II8 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.74□□□□□ -1.17
LRCH3Q96II8 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LRCH3Q96II8 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
LRCH3Q96II8 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
LRCH3Q96II8 RN7SKP189-201ENST00000365042 330 ntBASIC7.74□□□□□ -1.17
LRCH3Q96II8 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LRCH3Q96II8 AL360271.1-201ENST00000395679 510 ntBASIC7.74□□□□□ -1.17
LRCH3Q96II8 AC092634.6-201ENST00000418558 192 ntBASIC7.74□□□□□ -1.17
LRCH3Q96II8 RPL36P1-201ENST00000419720 225 ntBASIC7.74□□□□□ -1.17
LRCH3Q96II8 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC7.74□□□□□ -1.17
LRCH3Q96II8 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC7.74□□□□□ -1.17
LRCH3Q96II8 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC7.74□□□□□ -1.17
LRCH3Q96II8 GPR143P-201ENST00000434155 205 ntBASIC7.74□□□□□ -1.17
LRCH3Q96II8 RSU1P2-202ENST00000437884 485 ntBASIC7.74□□□□□ -1.17
LRCH3Q96II8 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC7.74□□□□□ -1.17
LRCH3Q96II8 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC7.74□□□□□ -1.17
LRCH3Q96II8 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LRCH3Q96II8 NF1P3-201ENST00000457709 450 ntBASIC7.74□□□□□ -1.17
LRCH3Q96II8 RPL38P3-201ENST00000484463 213 ntBASIC7.74□□□□□ -1.17
LRCH3Q96II8 RN7SL362P-201ENST00000494228 267 ntBASIC7.74□□□□□ -1.17
LRCH3Q96II8 RPSAP51-201ENST00000497462 645 ntBASIC7.74□□□□□ -1.17
LRCH3Q96II8 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC7.74□□□□□ -1.17
LRCH3Q96II8 Y_RNA.680-201ENST00000516441 93 ntBASIC7.74□□□□□ -1.17
LRCH3Q96II8 RNU6-1004P-201ENST00000516584 111 ntBASIC7.74□□□□□ -1.17
LRCH3Q96II8 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC7.74□□□□□ -1.17
LRCH3Q96II8 AP001804.3-201ENST00000525146 880 ntBASIC7.74□□□□□ -1.17
LRCH3Q96II8 AC092332.1-201ENST00000563684 829 ntBASIC7.74□□□□□ -1.17
LRCH3Q96II8 MIR3942-201ENST00000585264 109 ntBASIC7.74□□□□□ -1.17
LRCH3Q96II8 AC011468.4-201ENST00000603942 409 ntBASIC7.74□□□□□ -1.17
LRCH3Q96II8 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.74□□□□□ -1.17
LRCH3Q96II8 AC007546.1-201ENST00000619452 559 ntBASIC7.74□□□□□ -1.17
LRCH3Q96II8 AC005514.1-201ENST00000623521 208 ntBASIC7.74□□□□□ -1.17
LRCH3Q96II8 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LRCH3Q96II8 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LRCH3Q96II8 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LRCH3Q96II8 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LRCH3Q96II8 AC097634.1-201ENST00000604491 2467 ntBASIC7.74□□□□□ -1.17
LRCH3Q96II8 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC7.74□□□□□ -1.17
LRCH3Q96II8 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LRCH3Q96II8 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LRCH3Q96II8 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC7.74□□□□□ -1.17
LRCH3Q96II8 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
LRCH3Q96II8 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.74□□□□□ -1.17
LRCH3Q96II8 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC7.74□□□□□ -1.17
LRCH3Q96II8 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC7.74□□□□□ -1.17
LRCH3Q96II8 AC018765.1-201ENST00000623357 3446 ntBASIC7.74□□□□□ -1.17
LRCH3Q96II8 AL590065.1-201ENST00000603371 4774 ntBASIC7.74□□□□□ -1.17
LRCH3Q96II8 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LRCH3Q96II8 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LRCH3Q96II8 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LRCH3Q96II8 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 AC138627.1-203ENST00000641872 1680 ntBASIC7.73□□□□□ -1.17
LRCH3Q96II8 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LRCH3Q96II8 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LRCH3Q96II8 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LRCH3Q96II8 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LRCH3Q96II8 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LRCH3Q96II8 RNU6-1097P-201ENST00000363586 107 ntBASIC7.73□□□□□ -1.17
LRCH3Q96II8 RNU6-289P-201ENST00000364093 107 ntBASIC7.73□□□□□ -1.17
LRCH3Q96II8 RNA5SP512-201ENST00000364550 120 ntBASIC7.73□□□□□ -1.17
LRCH3Q96II8 RNU6-169P-201ENST00000365336 107 ntBASIC7.73□□□□□ -1.17
LRCH3Q96II8 Y_RNA.396-201ENST00000383949 103 ntBASIC7.73□□□□□ -1.17
LRCH3Q96II8 RNU6-1040P-201ENST00000383974 107 ntBASIC7.73□□□□□ -1.17
LRCH3Q96II8 MIR498-201ENST00000385134 124 ntBASIC7.73□□□□□ -1.17
LRCH3Q96II8 AC080125.1-201ENST00000414888 684 ntBASIC7.73□□□□□ -1.17
LRCH3Q96II8 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 AL356010.1-201ENST00000456364 102 ntBASIC7.73□□□□□ -1.17
LRCH3Q96II8 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 RNU6-1088P-201ENST00000516850 104 ntBASIC7.73□□□□□ -1.17
LRCH3Q96II8 RNU6-273P-201ENST00000516937 96 ntBASIC7.73□□□□□ -1.17
LRCH3Q96II8 IGLV1-62-201ENST00000518003 441 ntBASIC7.73□□□□□ -1.17
LRCH3Q96II8 IGHVIII-76-1-201ENST00000523776 286 ntBASIC7.73□□□□□ -1.17
LRCH3Q96II8 OR5M2P-201ENST00000529003 936 ntBASIC7.73□□□□□ -1.17
LRCH3Q96II8 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC7.73□□□□□ -1.17
LRCH3Q96II8 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms