Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.85□□□□□ -1.47
HPS3Q969F9 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HPS3Q969F9 AC108471.1-201ENST00000513977 287 ntBASIC5.85□□□□□ -1.47
HPS3Q969F9 AC018442.3-201ENST00000523025 183 ntBASIC5.85□□□□□ -1.47
HPS3Q969F9 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.85□□□□□ -1.47
HPS3Q969F9 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HPS3Q969F9 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.85□□□□□ -1.47
HPS3Q969F9 OR4U1P-201ENST00000554958 912 ntBASIC5.85□□□□□ -1.47
HPS3Q969F9 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.85□□□□□ -1.47
HPS3Q969F9 MTND4P33-201ENST00000556706 766 ntBASIC5.85□□□□□ -1.47
HPS3Q969F9 NMNAT1P5-201ENST00000559657 841 ntBASIC5.85□□□□□ -1.47
HPS3Q969F9 NPM1P47-201ENST00000560843 856 ntBASIC5.85□□□□□ -1.47
HPS3Q969F9 AC009097.3-201ENST00000563557 1018 ntBASIC5.85□□□□□ -1.47
HPS3Q969F9 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.85□□□□□ -1.47
HPS3Q969F9 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.85□□□□□ -1.47
HPS3Q969F9 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.85□□□□□ -1.47
HPS3Q969F9 FKBP1AP1-201ENST00000594588 318 ntBASIC5.85□□□□□ -1.47
HPS3Q969F9 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.85□□□□□ -1.47
HPS3Q969F9 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
HPS3Q969F9 MIR7973-1-201ENST00000614683 76 ntBASIC5.85□□□□□ -1.47
HPS3Q969F9 AC021755.4-201ENST00000616620 456 ntBASIC5.85□□□□□ -1.47
HPS3Q969F9 AL121895.2-201ENST00000619558 447 ntBASIC5.85□□□□□ -1.47
HPS3Q969F9 MIR6839-201ENST00000620425 113 ntBASIC5.85□□□□□ -1.47
HPS3Q969F9 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.85□□□□□ -1.47
HPS3Q969F9 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HPS3Q969F9 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HPS3Q969F9 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HPS3Q969F9 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HPS3Q969F9 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.85□□□□□ -1.47
HPS3Q969F9 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HPS3Q969F9 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HPS3Q969F9 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
HPS3Q969F9 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
HPS3Q969F9 MAPK10-328ENST00000641553 4009 ntBASIC5.85□□□□□ -1.47
HPS3Q969F9 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.85□□□□□ -1.47
HPS3Q969F9 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
HPS3Q969F9 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
HPS3Q969F9 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HPS3Q969F9 MTCO1P6-201ENST00000481192 1384 ntBASIC5.84□□□□□ -1.47
HPS3Q969F9 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HPS3Q969F9 U3.2-201ENST00000362981 210 ntBASIC5.84□□□□□ -1.47
HPS3Q969F9 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HPS3Q969F9 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HPS3Q969F9 MIR589-201ENST00000385238 99 ntBASIC5.84□□□□□ -1.47
HPS3Q969F9 RNU1-149P-201ENST00000390870 161 ntBASIC5.84□□□□□ -1.47
HPS3Q969F9 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HPS3Q969F9 AC009804.1-201ENST00000400949 179 ntBASIC5.84□□□□□ -1.47
HPS3Q969F9 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.84□□□□□ -1.47
HPS3Q969F9 AC002524.1-201ENST00000411687 547 ntBASIC5.84□□□□□ -1.47
HPS3Q969F9 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.84□□□□□ -1.47
HPS3Q969F9 RPS24P7-201ENST00000416921 246 ntBASIC5.84□□□□□ -1.47
HPS3Q969F9 VPS26BP1-201ENST00000417155 755 ntBASIC5.84□□□□□ -1.47
HPS3Q969F9 HMGB1P49-201ENST00000418882 569 ntBASIC5.84□□□□□ -1.47
HPS3Q969F9 HSPD1P12-201ENST00000429127 1069 ntBASIC5.84□□□□□ -1.47
HPS3Q969F9 CLUHP1-201ENST00000435012 1190 ntBASIC5.84□□□□□ -1.47
HPS3Q969F9 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.84□□□□□ -1.47
HPS3Q969F9 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.84□□□□□ -1.47
HPS3Q969F9 AC016772.1-201ENST00000444170 1261 ntBASIC5.84□□□□□ -1.47
HPS3Q969F9 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.84□□□□□ -1.47
HPS3Q969F9 AC005002.1-201ENST00000447458 540 ntBASIC5.84□□□□□ -1.47
HPS3Q969F9 OTX2P1-201ENST00000450956 354 ntBASIC5.84□□□□□ -1.47
HPS3Q969F9 AC091959.2-201ENST00000477363 321 ntBASIC5.84□□□□□ -1.47
HPS3Q969F9 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
HPS3Q969F9 EIF3LP3-201ENST00000495197 822 ntBASIC5.84□□□□□ -1.47
HPS3Q969F9 PGAM1P13-201ENST00000507497 754 ntBASIC5.84□□□□□ -1.47
HPS3Q969F9 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.84□□□□□ -1.47
HPS3Q969F9 snoZ278.1-201ENST00000517059 112 ntBASIC5.84□□□□□ -1.47
HPS3Q969F9 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.84□□□□□ -1.47
HPS3Q969F9 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.84□□□□□ -1.47
HPS3Q969F9 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.84□□□□□ -1.47
HPS3Q969F9 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.84□□□□□ -1.47
HPS3Q969F9 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.84□□□□□ -1.47
HPS3Q969F9 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.84□□□□□ -1.47
HPS3Q969F9 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.84□□□□□ -1.47
HPS3Q969F9 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.84□□□□□ -1.47
HPS3Q969F9 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.84□□□□□ -1.47
HPS3Q969F9 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.84□□□□□ -1.47
HPS3Q969F9 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.84□□□□□ -1.47
HPS3Q969F9 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.84□□□□□ -1.47
HPS3Q969F9 GAS5-AS1-201ENST00000602767 694 ntBASIC5.84□□□□□ -1.47
HPS3Q969F9 AC013470.4-201ENST00000619978 986 ntBASIC5.84□□□□□ -1.47
HPS3Q969F9 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.84□□□□□ -1.47
HPS3Q969F9 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
HPS3Q969F9 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
HPS3Q969F9 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.48
HPS3Q969F9 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
HPS3Q969F9 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
HPS3Q969F9 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.84□□□□□ -1.48
HPS3Q969F9 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
HPS3Q969F9 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
HPS3Q969F9 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
HPS3Q969F9 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.83□□□□□ -1.48
HPS3Q969F9 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HPS3Q969F9 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HPS3Q969F9 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
HPS3Q969F9 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HPS3Q969F9 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
HPS3Q969F9 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HPS3Q969F9 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.83□□□□□ -1.48
HPS3Q969F9 MTND4P31-201ENST00000425607 1343 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms