Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
TOPBP1Q92547 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TOPBP1Q92547 AL359922.3-201ENST00000624779 1670 ntBASIC7.18□□□□□ -1.26
TOPBP1Q92547 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC7.18□□□□□ -1.26
TOPBP1Q92547 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TOPBP1Q92547 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
TOPBP1Q92547 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
TOPBP1Q92547 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TOPBP1Q92547 TTC41P-205ENST00000551270 3963 ntBASIC7.18□□□□□ -1.26
TOPBP1Q92547 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC7.18□□□□□ -1.26
TOPBP1Q92547 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TOPBP1Q92547 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TOPBP1Q92547 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TOPBP1Q92547 RNA5SP175-201ENST00000364275 119 ntBASIC7.17□□□□□ -1.26
TOPBP1Q92547 AL139039.2-201ENST00000407436 479 ntBASIC7.17□□□□□ -1.26
TOPBP1Q92547 ACTR3P3-201ENST00000480448 893 ntBASIC7.17□□□□□ -1.26
TOPBP1Q92547 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC7.17□□□□□ -1.26
TOPBP1Q92547 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC7.17□□□□□ -1.26
TOPBP1Q92547 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TOPBP1Q92547 AC015967.1-201ENST00000619893 476 ntBASIC7.17□□□□□ -1.26
TOPBP1Q92547 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TOPBP1Q92547 ARHGAP42P1-201ENST00000507474 1976 ntBASIC7.17□□□□□ -1.26
TOPBP1Q92547 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TOPBP1Q92547 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TOPBP1Q92547 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TOPBP1Q92547 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
TOPBP1Q92547 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.17□□□□□ -1.26
TOPBP1Q92547 PAPPA-AS1-201ENST00000445861 2450 ntBASIC7.17□□□□□ -1.26
TOPBP1Q92547 AL079305.1-201ENST00000623159 3008 ntBASIC7.17□□□□□ -1.26
TOPBP1Q92547 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
TOPBP1Q92547 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
TOPBP1Q92547 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC7.17□□□□□ -1.26
TOPBP1Q92547 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TOPBP1Q92547 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC7.17□□□□□ -1.26
TOPBP1Q92547 RNA5SP307-201ENST00000362863 116 ntBASIC7.17□□□□□ -1.26
TOPBP1Q92547 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC7.17□□□□□ -1.26
TOPBP1Q92547 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TOPBP1Q92547 RPS3AP12-201ENST00000443616 753 ntBASIC7.17□□□□□ -1.26
TOPBP1Q92547 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC7.17□□□□□ -1.26
TOPBP1Q92547 RPL23AP81-201ENST00000455252 467 ntBASIC7.17□□□□□ -1.26
TOPBP1Q92547 AF213884.1-201ENST00000488102 463 ntBASIC7.17□□□□□ -1.26
TOPBP1Q92547 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC7.17□□□□□ -1.26
TOPBP1Q92547 ACTR3BP4-201ENST00000503033 1244 ntBASIC7.17□□□□□ -1.26
TOPBP1Q92547 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC7.17□□□□□ -1.26
TOPBP1Q92547 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC7.17□□□□□ -1.26
TOPBP1Q92547 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC7.17□□□□□ -1.26
TOPBP1Q92547 AC005034.4-201ENST00000603612 899 ntBASIC7.17□□□□□ -1.26
TOPBP1Q92547 AL160281.1-201ENST00000605307 311 ntBASIC7.17□□□□□ -1.26
TOPBP1Q92547 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC7.17□□□□□ -1.26
TOPBP1Q92547 NXPH1-205ENST00000602349 1953 ntBASIC7.16□□□□□ -1.26
TOPBP1Q92547 USP9YP4-201ENST00000424401 1745 ntBASIC7.16□□□□□ -1.26
TOPBP1Q92547 AC006042.3-201ENST00000454684 1469 ntBASIC7.16□□□□□ -1.26
TOPBP1Q92547 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
TOPBP1Q92547 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TOPBP1Q92547 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
TOPBP1Q92547 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TOPBP1Q92547 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
TOPBP1Q92547 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TOPBP1Q92547 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TOPBP1Q92547 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
TOPBP1Q92547 RNU6-213P-201ENST00000384051 104 ntBASIC7.16□□□□□ -1.26
TOPBP1Q92547 AC062016.2-201ENST00000420950 676 ntBASIC7.16□□□□□ -1.26
TOPBP1Q92547 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TOPBP1Q92547 TBCAP1-201ENST00000436520 327 ntBASIC7.16□□□□□ -1.26
TOPBP1Q92547 DDX39BP2-208ENST00000453923 258 ntBASIC7.16□□□□□ -1.26
TOPBP1Q92547 AC104164.2-201ENST00000496953 495 ntBASIC7.16□□□□□ -1.26
TOPBP1Q92547 AC006499.5-201ENST00000505037 514 ntBASIC7.16□□□□□ -1.26
TOPBP1Q92547 RNA5SP446-201ENST00000515955 82 ntBASIC7.16□□□□□ -1.26
TOPBP1Q92547 RNU6-352P-201ENST00000516908 107 ntBASIC7.16□□□□□ -1.26
TOPBP1Q92547 PAICSP4-201ENST00000517543 1253 ntBASIC7.16□□□□□ -1.26
TOPBP1Q92547 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC7.16□□□□□ -1.26
TOPBP1Q92547 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC7.15□□□□□ -1.26
TOPBP1Q92547 AL022323.4-201ENST00000623980 13120 ntBASIC7.15□□□□□ -1.26
TOPBP1Q92547 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
TOPBP1Q92547 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
TOPBP1Q92547 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
TOPBP1Q92547 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC7.15□□□□□ -1.26
TOPBP1Q92547 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
TOPBP1Q92547 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.15□□□□□ -1.26
TOPBP1Q92547 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC7.15□□□□□ -1.26
TOPBP1Q92547 AC032011.1-201ENST00000611703 1549 ntBASIC7.15□□□□□ -1.26
TOPBP1Q92547 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
TOPBP1Q92547 CDY14P-201ENST00000431260 1014 ntBASIC7.15□□□□□ -1.27
TOPBP1Q92547 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC7.15□□□□□ -1.27
TOPBP1Q92547 CDY12P-201ENST00000440679 1015 ntBASIC7.15□□□□□ -1.27
TOPBP1Q92547 AL353748.1-201ENST00000440753 474 ntBASIC7.15□□□□□ -1.27
TOPBP1Q92547 CDY13P-201ENST00000445813 1015 ntBASIC7.15□□□□□ -1.27
TOPBP1Q92547 CDY23P-201ENST00000451661 1014 ntBASIC7.15□□□□□ -1.27
TOPBP1Q92547 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC7.15□□□□□ -1.27
TOPBP1Q92547 ALG13-211ENST00000473389 693 ntTSL 2 BASIC7.15□□□□□ -1.27
TOPBP1Q92547 GAPDHP36-201ENST00000480688 918 ntBASIC7.15□□□□□ -1.27
TOPBP1Q92547 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC7.15□□□□□ -1.27
TOPBP1Q92547 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC7.15□□□□□ -1.27
TOPBP1Q92547 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC7.15□□□□□ -1.27
TOPBP1Q92547 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC7.15□□□□□ -1.27
TOPBP1Q92547 RPL23AP97-201ENST00000568955 471 ntBASIC7.15□□□□□ -1.27
TOPBP1Q92547 AF131215.7-201ENST00000602443 707 ntBASIC7.15□□□□□ -1.27
TOPBP1Q92547 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC7.15□□□□□ -1.27
TOPBP1Q92547 AL606490.9-201ENST00000603331 271 ntBASIC7.15□□□□□ -1.27
TOPBP1Q92547 BNIP3P11-201ENST00000603878 563 ntBASIC7.15□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms